Transcript Information: R_Transcript_80496.p1


Annotated TAIR IDAT3G47120.1
Annotated Gene NameRNA recognition motif (RRM)-containing protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:17351334-17352769 | Reverse length=352
E-Value1E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.6871222045003
Replicate 22.9474875801042
Replicate 35.9549577806289
Condition 2: 8 Hour
Replicate 15.5591825096865
Replicate 27.1694335192709
Replicate 310.255502707532
Condition 3: 24 Hour
Replicate 111.817103547016
Replicate 26.4598591897878
Replicate 310.393814704003


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_80496.p1 GENE.R_Transcript_80496~~R_Transcript_80496.p1 ORF type:3prime_partial len:577 (+),score=127.38,Torus|PF16131.1|0.00049,Torus|PF16131.1|0.0014,Torus|PF16131.1|2e-07,zf-CCCH|PF00642.20|4.3e+03,zf-CCCH|PF00642.20|9.4e-05,zf-CCCH|PF00642.20|5.2e-05,zf-CCCH|PF00642.20|1.8e-05 R_Transcript_80496:318-2045(+)
ATGAGCGGAAGTAGCAGAAGAAGACATTCCAAATGGGATCATAAAGGTCCGGAAGTCTTATCTGAAAGTTTTCATGATACAGCTCCTCCACGGAAGCCTAGAGAAACTCTTTCACCAGGCAGACGCTCACATAGACATGAAAGCCGTAGCAAAGAAAGGATGATGACATGGGATCGAGAGGGGAACTGCAGGACATCCCCAGATCTTGATGAATGGACACAACCTCATCATAGTCGGTCTCCTAGAAATGGTTGGGGCCAGTCGTACAGGAGCAGGAGTCGGAGCAGGAGCAGGAGTAGGAGCCCAGCTCATAACTCAAGGCGGGAGTCAGCATTAACTGAGAAGAGTAGAAGCAAATCTGGAGTTTCAGCTTCATTGTGTAGGGATTATGCTGCTGGAAGATGCAGGAGGGGAAGTCATTGTCAATTTCTTCACCAAGATTCTCAACCGTACGAAAGGGGGAGGTTTGGAAGCAGTCCACCTGATGAATGGGAAGGTAAGCATCGGAGGCCTGGAGGTTCAAGATACTCCCCTGATGACACTAAAGACTATGTTAGAAGTGAAAAATCTTCACCTGTATGTAATGATTATGTGAGAGGCCAGTGTAGAAGAGGTGCTTCATGCAGATATGTGCATCATGATGGTGCAACTGATGTATTTGAGAGAGGACCTGTTGACGATGTGTATAGAGACAGGCATAACGACCGCAGAATTCGGGATACTTATTCGGATAGGAACTATGACCGTGAGCCTCCTAAGAGAGGTGAAACTCTCTGCAAATTTTTTGCTGCTGGAAATTGTCGGAATGGAAAGCGCTGCAGATTTTCTCATCAAGTTCCAGAAGACTTCAGCCCAGAGAAGCGGTCCCACGATGAAAGACGGGGGCCAGAACATAAATTTGAGGGCAGCCCAGTTTGGGATGGTCCTAGATGGGATGATGCACCTAGAGCGTCAAACATTCCTGCAGTGCAGGGTTGGGAAGAAGAGAGAAATGAGATTGCAGATGTAGGAAATGAAGTTATTACAGTGAGGTCTGGGGATGATTCTTGGAGCCTCGGCATTCCCAACACGAAACAAACATGGGATGCCCCTGCTAGCATTGATAAGCCAAAGAGTAGGGATGAAGAGCAGCCCCTTCATTGGAAGTCAGAAAATAGTGTCCCTGGCATGGGTCTTTCTGCAACGAGAAGTACAGAGAATTTTTCTGGTGATATGGAGATTTCTCCGAGGGACATTCTCAAGCAGCATGACCTAAGTTCGTCAAATCCACAAACTTCATCTCTTTCTAACATTTCTTTTGCTGCTGCTCAACAAGATGCTGGTGGCGAGGCTTCATATGAGAAGCCCTACCCCTCTGGATTCCAAGAGCAGAGAGTATTTGATGATCCTTACTCTAGGCGGAATCCCAATTTTAAGGAGGAAAAACTAAATATGCATGCTGGAGAGGGTAGAAATGCCATGGTAAATTTCGATGGCTCATGCATAACTCCAAGTTTGCCATTGAATGTCCAACCAGGACCTAGTATATTCCAGAATGATCAGCGTATCAATGTTCAACCTATTGCAAGCACAAATCCTCCTGCTGGACAAGGTCAGCTGCCATTCCCCTTGAATCCTTCTGGTGGTGACAGAATGCAAACACCCACTCCAAATCCACCGGTGAATGTCCCACCAATGCAAACACCCACTCCGAATCCACTGGTAAATGTCCCGCCGATGCAAACGCCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_80496.p1 GENE.R_Transcript_80496~~R_Transcript_80496.p1 ORF type:3prime_partial len:577 (+),score=127.38,Torus|PF16131.1|0.00049,Torus|PF16131.1|0.0014,Torus|PF16131.1|2e-07,zf-CCCH|PF00642.20|4.3e+03,zf-CCCH|PF00642.20|9.4e-05,zf-CCCH|PF00642.20|5.2e-05,zf-CCCH|PF00642.20|1.8e-05 R_Transcript_80496:318-2045(+)
MSGSSRRRHSKWDHKGPEVLSESFHDTAPPRKPRETLSPGRRSHRHESRSKERMMTWDREGNCRTSPDLDEWTQPHHSRSPRNGWGQSYRSRSRSRSRSRSPAHNSRRESALTEKSRSKSGVSASLCRDYAAGRCRRGSHCQFLHQDSQPYERGRFGSSPPDEWEGKHRRPGGSRYSPDDTKDYVRSEKSSPVCNDYVRGQCRRGASCRYVHHDGATDVFERGPVDDVYRDRHNDRRIRDTYSDRNYDREPPKRGETLCKFFAAGNCRNGKRCRFSHQVPEDFSPEKRSHDERRGPEHKFEGSPVWDGPRWDDAPRASNIPAVQGWEEERNEIADVGNEVITVRSGDDSWSLGIPNTKQTWDAPASIDKPKSRDEEQPLHWKSENSVPGMGLSATRSTENFSGDMEISPRDILKQHDLSSSNPQTSSLSNISFAAAQQDAGGEASYEKPYPSGFQEQRVFDDPYSRRNPNFKEEKLNMHAGEGRNAMVNFDGSCITPSLPLNVQPGPSIFQNDQRINVQPIASTNPPAGQGQLPFPLNPSGGDRMQTPTPNPPVNVPPMQTPTPNPLVNVPPMQTP

Click here to download the sequence:
Link to NCBI Protein BLAST