Transcript Information: R_Transcript_80522.p1


Annotated TAIR IDAT2G41820.1
Annotated Gene NameLeucine-rich repeat protein kinase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:17447170-17449914 | Forward length=890
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.8123953878155
Replicate 22.4867126750029
Replicate 34.2486239563814
Condition 2: 8 Hour
Replicate 13.3650965234762
Replicate 23.872554955736
Replicate 35.4150614923389
Condition 3: 24 Hour
Replicate 15.2071897957809
Replicate 23.0064151783804
Replicate 36.3584393503836


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_80522.p1 GENE.R_Transcript_80522~~R_Transcript_80522.p1 ORF type:5prime_partial len:895 (+),score=171.92,LRR_8|PF13855.2|1.2,LRR_8|PF13855.2|5.1e-11,LRR_8|PF13855.2|5.7e-05,LRR_8|PF13855.2|3.9,LRR_8|PF13855.2|5.8e-06,LRR_8|PF13855.2|0.0005,LRR_8|PF13855.2|0.0038,LRR_8|PF13855.2|0.0012,LRR_8|PF13855.2|0.00014,LRR_8|PF13855.2|0.42,LRR_8|PF13855.2|0.015,Pkinase_Tyr|PF07714.13|8.8e-29,Pkinase|PF00069.21|1.3e-26,LRR_4|PF12799.3|0.022,LRR_4|PF12799.3|0.0011,LRR_4|PF12799.3|0.61,LRR_4|PF12799.3|2.5,LRR_4|PF12799.3|0.62,LRR_4|PF12799.3|0.12,LRR_4|PF12799.3|0.014,LRR_4|PF12799.3|0.37,LRR_4|PF12799.3|0.51,LRR_4|PF12799.3|0.027,LRR_4|PF12799.3|2.1,LRR_4|PF12799.3|1.6e+04,LRR_1|PF00560.29|5e+03,LRR_1|PF00560.29|0.27,LRR_1|PF00560.29|25,LRR_1|PF00560.29|14,LRR_1|PF00560.29|6.9e+03,LRR_1|PF00560.29|38,LRR_1|PF00560.29|13,LRR_1|PF00560.29|1.4e+02,LRR_1|PF00560.29|7.4e+02,LRR_1|PF00560.29|8.8,LRR_1|PF00560.29|1.1,LRR_1|PF00560.29|18,LRR_1|PF00560.29|50,LRR_1|PF00560.29|6.6e+02,LRR_1|PF00560.29|54,LRR_1|PF00560.29|0.9,LRR_1|PF00560.29|7.4e+02,LRR_1|PF00560.29|5.2e+03 R_Transcript_80522:1-2685(+)
AAAAAAAAAAAGATGCTAAGAATTTTGTCAAGAATTTTCAATCTTTTGGTACTTTGGATTTTGGTACTAAAGACTGAGCTAGTGAGCTCTGAGCTACCTGATCAAACCATAATGTTTGCAATAAATGAAGAAATTGGGGTACCAGGATGGGGTGTAAACAGCTCAGATTATTGCTTGTGGAGAGGAATTAAATGCAGCCAAAACCAAAGTGTTGAAGTTCTTGATCTTTCTAGCCATTGGCTTAGAGGTAATATCACTTTGATTTCTGAGCTCAAAGCCTTGAAATGGCTTGACCTTTCAAGTAACTTCTTTACTGGTCCTATACCTTCTTCTTTTGGTCAGTTATCTAAGCTTGAGTTTCTTGATTTGTCTACAAACAAGTTTAGTAGTTTTATTCCTAAGGAGTTGGGTAAATTGAGGAACGTTAGAGCATTGAACCTCTCTTATAATAATCTTGTTGGTGAGATACCTGAGGAGCTTGATGGGTTAGTTAAATTGCAGGATTTTCAGGTTTCTGGTAACAAGTTAAATGGTTCTATCCCTCATTGGGTTGGGAATTTAACCAACCTTAGAGTTTTTGCAGCGTATGAGAACTTTTTGGGAGGTGAAATTCCTGGTAACTTGGGTTCTGTTTCTGAGCTTGAGCTTTTGAACCTTCACTCAAACCAGCTTGAAGGGGTTATACCTGAGAGCCTGTTTTCTCAGGGGAAGTTGGAGGTTTTGGTGCTTACTCAGAATAGATTGTCGGGCAACATTCCTGAGTCTATTGGGAACTGTGATAATCTTTCGAGTATTCGGATTGGGAACAACAATCTTATAGGTAGTATTCCAAAAACTGTTGGGAATATAACTAGCCTGACATATTTTGAGGCTAACAATAACAATCTCTCTGGGGAGATTGTTTCGGAGTTTGCTCATTGCACTAATCTGACACTTCTGAATTTGGCCTCGAATGGGTTTACTGGGATCATTCCCCCTGAGCTCGGACAGCTTATGAATCTGCAGGAGTTGATTGTTTCGGGTAATAGTCTGTTTGGGGAGATACCTGAATCAATTCTTCATAACAGGAATCTTAACAAGCTTGATCTTAGCAACAACAGATTCAATGGCACCATACCGGTGGATGTGTGCAACACCTCAAGGTTGCAGTTCTTGCTGTTAGGGCAGAACTCGATCAGGGGAGAAATACCTAACGAGATTGGAAATTGTGTGAAATTGCTGGATTTGGAACTGGCTGGCAATTATCTGACTGGAATGATCCCTCCTGATATTGGTCGTTTGAAGAACTTGCAGATATCGTTGAATTTAAGCTTCAATCACCTGCATGGACCACTCCCTGCTGAGTTGGGAAAGCTTGACAAGTTGGTTTCCTTGGATGTTTCTAACAACCGACTTTCTGGACCAATCCCAGCAGCTCTTAAGGGTATGCTGAGTTTGATTGAAGTCAATTTCTCAAACAATCTGTTCACTGGCCCTATACCTGCCTTTGTACCATTTCAGAAGAGCCTGAATACAAGTTTTGCAGGAAACAAAGGGCTATGTGGCCAGCCATTGAGTTTTTCTTGTGGCCCCTCTGATGGAGATGATCAGGTTAACTACCCTCGAAAGGTTTCGTACAGGATCATATTAGCTGTTATTGGCTCTGGCTTGGCGGTTTTCATTTCTGTCACAGTGGTAGTCCTGCTGTTTATGATGCGAGAGAAGCAAGAACGATCAGCCAAAGATGTGGGTGATGTGGATGAAAGTGTCAATAGCCGACCCTTGATAACAGCTGGTAATGTCTTCATTGATAATTTCAGGCAAGCAATAGATTTTGACGCTGTTGTCAAGGCGACTTTCAAAGACACAAACAAGCTCACCAGCGGAACCTTCAGCATAGTTTATAAAGCCACCATGCCCTCTGGGCTCGTTCTCTTGGTGAGGAGTCTTAAATCAGTTGACAAGACCATAATTCACCACCAGAACAAAATGATTAGGGAGCTTGAAAGGTTGGGTCGGATTTGCCATGATCATCTGGTTCGACCTATTGGGTTTGTCATTTATGAGGATGTTGCCCTCGTGCTACACGAGTACTTGTGCAACGGAACTTTAGCTCAGTTACTTCACGAGAGTAGCCAGAAGCCCGAGTATGAACCTGACTGGCCTACAAGGCTCTCGATTGCCATTGGAGTAGCCGAAGGGTTGGCATTCCTGCATAGCGTGGCTGTCATTCACCTCGATATCTCTTCTGGCAATATACTCCTAGATGCCAATATGAGTCCTCGTGTTGCAGAGATCGAGATATCAAAGCTGCTTGATCCTTCCAGAGGAACTGCCAGTATTAGTGCAGTTGCAGGTTCATTTGGCTACATTCCACCAGAATATGCATACACAATGCAAGTTACAGCACCGGGTAATGTGTACAGTTACGGTGTGATCTTGCTTGAAATTCTGACAACACATTTACCTGTCGAGGAGGCCTTTGGTGAGGGAACCGATCTGGTGAAGTGGGTTCAGAATGCTCCGCTGAGGGGGGAGACTCCCGAGCAGATACTTGATGCAAGGCTTAGCACTGTTTCATTTGCTTTGAGGAAAGAAATGCTCACAGCTTTGAAGGTTGCGCTACAATGCACAGACAGTACACCCGCTAAAAGACCCAAGATGAAGAAAGTAGCCGAAATGCTTCAAGAGATAAAGCAGAACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_80522.p1 GENE.R_Transcript_80522~~R_Transcript_80522.p1 ORF type:5prime_partial len:895 (+),score=171.92,LRR_8|PF13855.2|1.2,LRR_8|PF13855.2|5.1e-11,LRR_8|PF13855.2|5.7e-05,LRR_8|PF13855.2|3.9,LRR_8|PF13855.2|5.8e-06,LRR_8|PF13855.2|0.0005,LRR_8|PF13855.2|0.0038,LRR_8|PF13855.2|0.0012,LRR_8|PF13855.2|0.00014,LRR_8|PF13855.2|0.42,LRR_8|PF13855.2|0.015,Pkinase_Tyr|PF07714.13|8.8e-29,Pkinase|PF00069.21|1.3e-26,LRR_4|PF12799.3|0.022,LRR_4|PF12799.3|0.0011,LRR_4|PF12799.3|0.61,LRR_4|PF12799.3|2.5,LRR_4|PF12799.3|0.62,LRR_4|PF12799.3|0.12,LRR_4|PF12799.3|0.014,LRR_4|PF12799.3|0.37,LRR_4|PF12799.3|0.51,LRR_4|PF12799.3|0.027,LRR_4|PF12799.3|2.1,LRR_4|PF12799.3|1.6e+04,LRR_1|PF00560.29|5e+03,LRR_1|PF00560.29|0.27,LRR_1|PF00560.29|25,LRR_1|PF00560.29|14,LRR_1|PF00560.29|6.9e+03,LRR_1|PF00560.29|38,LRR_1|PF00560.29|13,LRR_1|PF00560.29|1.4e+02,LRR_1|PF00560.29|7.4e+02,LRR_1|PF00560.29|8.8,LRR_1|PF00560.29|1.1,LRR_1|PF00560.29|18,LRR_1|PF00560.29|50,LRR_1|PF00560.29|6.6e+02,LRR_1|PF00560.29|54,LRR_1|PF00560.29|0.9,LRR_1|PF00560.29|7.4e+02,LRR_1|PF00560.29|5.2e+03 R_Transcript_80522:1-2685(+)
KKKKMLRILSRIFNLLVLWILVLKTELVSSELPDQTIMFAINEEIGVPGWGVNSSDYCLWRGIKCSQNQSVEVLDLSSHWLRGNITLISELKALKWLDLSSNFFTGPIPSSFGQLSKLEFLDLSTNKFSSFIPKELGKLRNVRALNLSYNNLVGEIPEELDGLVKLQDFQVSGNKLNGSIPHWVGNLTNLRVFAAYENFLGGEIPGNLGSVSELELLNLHSNQLEGVIPESLFSQGKLEVLVLTQNRLSGNIPESIGNCDNLSSIRIGNNNLIGSIPKTVGNITSLTYFEANNNNLSGEIVSEFAHCTNLTLLNLASNGFTGIIPPELGQLMNLQELIVSGNSLFGEIPESILHNRNLNKLDLSNNRFNGTIPVDVCNTSRLQFLLLGQNSIRGEIPNEIGNCVKLLDLELAGNYLTGMIPPDIGRLKNLQISLNLSFNHLHGPLPAELGKLDKLVSLDVSNNRLSGPIPAALKGMLSLIEVNFSNNLFTGPIPAFVPFQKSLNTSFAGNKGLCGQPLSFSCGPSDGDDQVNYPRKVSYRIILAVIGSGLAVFISVTVVVLLFMMREKQERSAKDVGDVDESVNSRPLITAGNVFIDNFRQAIDFDAVVKATFKDTNKLTSGTFSIVYKATMPSGLVLLVRSLKSVDKTIIHHQNKMIRELERLGRICHDHLVRPIGFVIYEDVALVLHEYLCNGTLAQLLHESSQKPEYEPDWPTRLSIAIGVAEGLAFLHSVAVIHLDISSGNILLDANMSPRVAEIEISKLLDPSRGTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVILLEILTTHLPVEEAFGEGTDLVKWVQNAPLRGETPEQILDARLSTVSFALRKEMLTALKVALQCTDSTPAKRPKMKKVAEMLQEIKQN*

Click here to download the sequence:
Link to NCBI Protein BLAST