Transcript Information: R_Transcript_80559.p1


Annotated TAIR IDAT5G50340.1
Annotated Gene NameATP-dependent peptidases;nucleotide binding;serine-type endopeptidases;DNA helicases;ATP binding;damaged DNA binding;nucleoside-triphosphatases
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:20491635-20495830 | Reverse length=587
E-Value3.5E-238
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.9698656064828
Replicate 22.3560205087595
Replicate 33.628790114242
Condition 2: 8 Hour
Replicate 13.1112402655741
Replicate 23.431620480578
Replicate 34.9123170655833
Condition 3: 24 Hour
Replicate 15.6447413810692
Replicate 24.0398246482741
Replicate 36.3929434481532


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_80559.p1 GENE.R_Transcript_80559~~R_Transcript_80559.p1 ORF type:complete len:606 (+),score=109.11,AAA_25|PF13481.2|1.3e-25,KaiC|PF06745.9|3.3e-07,KaiC|PF06745.9|0.015,ChlI|PF13541.2|2.8e-08,DnaB_C|PF03796.11|5.9e-06,DnaB_C|PF03796.11|53 R_Transcript_80559:194-2011(+)
ATGCAAGCATTAGAAATGGGAGCTTTCCATCTTGTTCGTTCTCAATCTCACCTTCTCACTTTCCCCAAATTCAAACTCCTCTCACCTCCTCCTAAAATCATCTGCCATTCCCAAAATCAAAACCCTCAATTTTCCCGCCATTTCAAACCCCCAAATTCACGCCCAATTCACTCATTCAACCACAAATCCTTCCCTGAATCACCGCTCCTTGACCCCAATACTCAAAACAACGAAAACCCACCAACCCCAGAAGAACCCATCCCTACCCAAAACCCTAGAACTTGGTCAGTCTTCAATGGAGGACAACAAGTTGACAACAAGGTTAGTGGGTATGCAAGGAATTATGTTGGCAAAGGGAAAAAAGGCAAGAATAATAATAAGATGTATTGGGTTTGTAGTGATTGTGGCCATAGTGAAGGCCAATGGTGGGGGACTTGTAAGTCTTGTAATAAAGTTGGCACCTTGAAGCCATTTTCCGTGTCCGAAAATGTGGATGGAAATAAGAGTGTTGGGGTTCTGGTTTCCGAGGAGGTGACTAGGTCTTGGTTGCCTGACCAGAAGCAGGGTGGGCCAGTCAGGTTGGCCGATGTTAATCGTGGGATGAATCATTTGGATTGGAGAATTCGATTGTCTGGGACGTTTGGTACTGAAGTTGCGAGAGTGCTTGGTGGCGGAGTTATGCCAGGTTCCTTGATTCTAGTTGGTGGCGATCCCGGTGTTGGCAAGAGCACCCTTTCATTGCAGATTGCTGCATTAATAGCAGAAAGTTGTGATGTTGGTGGAGCTGCTCCAGTCATTTACATCTCTGGTGAAGAGAGTGTTGAGCAAATTGGAAACAGAGCAGATCGCCTGAACATCGACACGGAGGAGCTCTATCTGTATTCAAGTACTGATATTGAGGATATTTTAGGAAAGGTTCAAGTGCTAGGTCCACGTGCTCTGATAATCGACTCCATCCAGACAGTATATTTAAAAGGAGTAACGGGAAGTCCTGGAGGGCTGGTGCAGGTAAAAGAATGTACATCAGCATTGCTTCGGTTCTCAAAGAAAACAAACATCCCTGTTCTATTGATTGGACATGTGAACAAGTCTGGAGACATTGCAGGACCTCGAGTTTTGGAGCACATTGTTGACGTTGTTTTATATATGGAGGGAGAAAAGAATTCATTATATCGCTTACTTCGGTCTGTGAAAAACCGTTTTGGATCCACTGATGAGTTGGGAGTATTCGAAATGTCAGAGTCTGGGCTTATAGCAGCATCAAACCCTAGTGAGATATACTTGAATGAGGAGCATTCAGATTCAGATCATTTAGCTGGACTTGCTGTTGCAGTAATCATTGATGGCTCTCGATCTTTTCTTATTGAAGTCCAGGCCCTATGTGTATGTGGAGCCTCTGTTACTAGGCATGTTAACGGGGTTCAAGCAAGCAGAGCTGATATGATTATTTCGGTTCTTAAAAAGCAGGCTGGGCTGAAGCTTGAAGATAATGCAATATTCCTCAATGTTATTAGCGGAGTATCTCTGACAGAAACTGCAGGAGATCTTGCTGTAGCAGCAGCAATTTGCAGCAGTTTCTTGGAGTTCCCAATTCCAAATCATGTAGCATTTATTGGAGAAATTGGCCTTGGCGGTGAGCTTCGAATGGTTCCTAGAATAGAAAAAAGGGTCAATACATTGGCTAAACTCGGCTATAAGACGTGCATTGTCCCAAAGTCAGCTGAAAAAGCTCTAGCAAATTTTAACTCTGAAGGTATACAGATGGTGGGCTGCAAGAATTTGAAACAAGTCATTGATAAGGTCTTCAGAACAGCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_80559.p1 GENE.R_Transcript_80559~~R_Transcript_80559.p1 ORF type:complete len:606 (+),score=109.11,AAA_25|PF13481.2|1.3e-25,KaiC|PF06745.9|3.3e-07,KaiC|PF06745.9|0.015,ChlI|PF13541.2|2.8e-08,DnaB_C|PF03796.11|5.9e-06,DnaB_C|PF03796.11|53 R_Transcript_80559:194-2011(+)
MQALEMGAFHLVRSQSHLLTFPKFKLLSPPPKIICHSQNQNPQFSRHFKPPNSRPIHSFNHKSFPESPLLDPNTQNNENPPTPEEPIPTQNPRTWSVFNGGQQVDNKVSGYARNYVGKGKKGKNNNKMYWVCSDCGHSEGQWWGTCKSCNKVGTLKPFSVSENVDGNKSVGVLVSEEVTRSWLPDQKQGGPVRLADVNRGMNHLDWRIRLSGTFGTEVARVLGGGVMPGSLILVGGDPGVGKSTLSLQIAALIAESCDVGGAAPVIYISGEESVEQIGNRADRLNIDTEELYLYSSTDIEDILGKVQVLGPRALIIDSIQTVYLKGVTGSPGGLVQVKECTSALLRFSKKTNIPVLLIGHVNKSGDIAGPRVLEHIVDVVLYMEGEKNSLYRLLRSVKNRFGSTDELGVFEMSESGLIAASNPSEIYLNEEHSDSDHLAGLAVAVIIDGSRSFLIEVQALCVCGASVTRHVNGVQASRADMIISVLKKQAGLKLEDNAIFLNVISGVSLTETAGDLAVAAAICSSFLEFPIPNHVAFIGEIGLGGELRMVPRIEKRVNTLAKLGYKTCIVPKSAEKALANFNSEGIQMVGCKNLKQVIDKVFRTA*

Click here to download the sequence:
Link to NCBI Protein BLAST