Transcript Information: R_Transcript_80572.p1


Annotated TAIR IDAT5G49720.1
Annotated Gene Nameglycosyl hydrolase 9A1
Annotated Gene Symbol(s)ATGH9A1, TSD1, DEC, KOR, RSW2, IRX2, KOR1, GH9A1
Annotation TypeOrtholog
Chromosome Positionchr5:20197765-20200168 | Reverse length=621
E-Value1.6E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.80358947599391
Replicate 20.79231322325653
Replicate 32.3050805128204
Condition 2: 8 Hour
Replicate 11.5399915061161
Replicate 20.42190343096577
Replicate 31.8265771693471
Condition 3: 24 Hour
Replicate 11.2994985223229
Replicate 20.5548492802661
Replicate 31.7895607605639


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_80572.p1 GENE.R_Transcript_80572~~R_Transcript_80572.p1 ORF type:internal len:159 (+),score=10.29,RVT_2|PF07727.10|6.4e-14 R_Transcript_80572:1-474(+)
ACCCAATTGGGTATGGAGTTTGATATGAAAGACTTAGGTCCGGCTAAGAAGATTTTGGGCATGGAGATACTTAGAGACCGTGCAAGGGGGCAACTCAAATTGTCTCAATCGAAGTACATTGATAAGGTTCTCAAAAGGTTTAGTATCTCCGATTGCAAGCCCGTATCTACTCCACTAGCATCTCATTTTCAACTATCATCCGCTCAATGTCCCCAAGATGAAGAGTCCAAAAAGAAGATGTCCAATGTTCCCTATTCCAATGCCGTCGGGAGTCTTATGTATGCCATGATTTGTACCCGACCGGATTTGGCTCACGCCGTAAGTGTTGTTAGCCGATTCATGCACAATCCGGGCAAACAACATTGGGAAGCCGTGAAGTGGATACTTCGTTATTTAAAAGGTGCTTCTCAGCCGTATGAGATTGTTCTTGAGCCCTGGTTACCCTTACGAAGAAATGCTCAGGACATTCCACAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_80572.p1 GENE.R_Transcript_80572~~R_Transcript_80572.p1 ORF type:internal len:159 (+),score=10.29,RVT_2|PF07727.10|6.4e-14 R_Transcript_80572:1-474(+)
TQLGMEFDMKDLGPAKKILGMEILRDRARGQLKLSQSKYIDKVLKRFSISDCKPVSTPLASHFQLSSAQCPQDEESKKKMSNVPYSNAVGSLMYAMICTRPDLAHAVSVVSRFMHNPGKQHWEAVKWILRYLKGASQPYEIVLEPWLPLRRNAQDIPQ

Click here to download the sequence:
Link to NCBI Protein BLAST