Transcript Information: R_Transcript_80601.p1


Annotated TAIR IDAT3G07550.1
Annotated Gene NameRNI-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:2409946-2411133 | Forward length=395
E-Value7.5E-145
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.8412779624419
Replicate 24.4289071190629
Replicate 36.3828669864279
Condition 2: 8 Hour
Replicate 14.3998038577081
Replicate 25.5902204602964
Replicate 35.8141877768427
Condition 3: 24 Hour
Replicate 17.1743147586575
Replicate 24.9968945923964
Replicate 37.0679046384773


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_80601.p1 GENE.R_Transcript_80601~~R_Transcript_80601.p1 ORF type:complete len:384 (+),score=44.18,LRR_4|PF12799.3|38,LRR_4|PF12799.3|0.0012,LRR_4|PF12799.3|0.45,LRR_4|PF12799.3|3e+03,LRR_4|PF12799.3|24,LRR_4|PF12799.3|0.85,F-box|PF00646.29|1.9e-05 R_Transcript_80601:285-1436(+)
ATGGAAGAGCCTCAGAGTGATAGTCCCACAACCATTTTGGATCTTCCTGATGACTGCCTAGTTTTCATATTCCAGTGTCTTACTCATTCCTCAGAGCGTGAAGCATTTGGACTAACTTGCCGTAGGTGGCTACAAATTCAGAATCGGAATTGTCGTTCCTTACAGTTCAATTGCTCATTCACCAATTTTAAGATCCCACTTTCGGAAACTCCCCAGAAGATTGGCACATATGAACTCTATAGGGTTTTGAACCGTTTCCAGCATCTGCAGTCATTGTCCCTATCAGGGTGTACAGAGCTACATGATTCCGGTTTAAAGCAGTTACAGCACTATGGTTCGAGTCTCCAAGCCTTAAGTTTAGATTGCTGTTTCGAGATCACTGACATTGGTCTTTCGTTTGTTGCTAGTGGCTGTCCCTCGTTGAAGTTTATTAGCCTTTACCGTTGTAACATCACTGATCTGGGTTTGGAGACCTTGGCTAAGTCTTGTTTGGCTCTGGAAGATGTTGATCTTTTGTATTGTTCGTATATAACTGATCGTGGTATAAGTTTTATTGTCCAAAATTGTTTTGAGCTCCGTGCCATGAAGATCTCCAACTGCAGGGGAATCACAGGTGTTGGGTTTAGAGGGTGTTCTGAAACTCTGGCTTGTTTAGAAGCTGAATCATGTAAACTGGAGCCTGAAGGGATATCGAGTATTGTCAGTGGAGGGGGGCTCGAGTATCTAGACATCTCGAGACTCTGCTGGTCCATCGTTGGGGATGGGTTGGCAGCAATTGGGGCAGGGTATGGTGCTAGGCTTCGTGTTCTCCATATAAGACACTGTAGTACAGTAAGAGATGAGTCTGCTTCAGCAATTGCAAAGGGCTGCCCCTCACTGGTGGAGTGGAATTTGGCATTGTGTCATGAGATTAGGGTTGCAGGCTGGGAGTCCATTGCATTGAACTGTCACAAACTGGAAAAGCTTCATGTCAACCGCTGTCGAAATCTTTGTGGTCGGGGGTTGCAAGCTCTGGGTAACGGTTGCAAGCAACTCTCTGTCCTATACATGAGTGGTTGTCCTCGAATCAGTTCAATCGCTGTTGAACTTTTTAGATTATTGAGGCAATGTTGTCATCAAAGAGGTGGAAGAGCTAAACATTGGACCACCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_80601.p1 GENE.R_Transcript_80601~~R_Transcript_80601.p1 ORF type:complete len:384 (+),score=44.18,LRR_4|PF12799.3|38,LRR_4|PF12799.3|0.0012,LRR_4|PF12799.3|0.45,LRR_4|PF12799.3|3e+03,LRR_4|PF12799.3|24,LRR_4|PF12799.3|0.85,F-box|PF00646.29|1.9e-05 R_Transcript_80601:285-1436(+)
MEEPQSDSPTTILDLPDDCLVFIFQCLTHSSEREAFGLTCRRWLQIQNRNCRSLQFNCSFTNFKIPLSETPQKIGTYELYRVLNRFQHLQSLSLSGCTELHDSGLKQLQHYGSSLQALSLDCCFEITDIGLSFVASGCPSLKFISLYRCNITDLGLETLAKSCLALEDVDLLYCSYITDRGISFIVQNCFELRAMKISNCRGITGVGFRGCSETLACLEAESCKLEPEGISSIVSGGGLEYLDISRLCWSIVGDGLAAIGAGYGARLRVLHIRHCSTVRDESASAIAKGCPSLVEWNLALCHEIRVAGWESIALNCHKLEKLHVNRCRNLCGRGLQALGNGCKQLSVLYMSGCPRISSIAVELFRLLRQCCHQRGGRAKHWTT*

Click here to download the sequence:
Link to NCBI Protein BLAST