Transcript Information: R_Transcript_80609.p1


Annotated TAIR IDAT3G17740.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1740 (InterPro:IPR013633); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G17712.1); Has 409 Blast hits to 335 proteins in 133 species: Archae - 1; Bacteria - 0; Metazoa - 140; Fungi - 188; Plants - 42; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:6068003-6072814 | Reverse length=1149
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.9987869074882
Replicate 24.6797902721211
Replicate 35.1838475345691
Condition 2: 8 Hour
Replicate 15.3111953002564
Replicate 26.5497715384515
Replicate 37.9364856000326
Condition 3: 24 Hour
Replicate 16.7442234725279
Replicate 24.5767958244323
Replicate 38.3363930745997


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_80609.p1 GENE.R_Transcript_80609~~R_Transcript_80609.p1 ORF type:complete len:1171 (+),score=264.75,NRDE-2|PF08424.6|6.6e+02,NRDE-2|PF08424.6|3.1e-88,NRDE-2|PF08424.6|5.9e+02 R_Transcript_80609:139-3651(+)
ATGCACCCAGACCCAGCAATGGAAGAAACCGAGGCCCCGCCGATCGACGAAGCAGCAGGTGCTCCAGAAAACCAACAGACATCAACGCTACTCTCTCTCTTCCCCGTATCGAATACTACCACCGTAGCCACCACAAGTCCTCAGTGGCTACGCAATTCCAGCTTCACTACTGACCTCTCTGTCGTGAACGACGCCGTTTCCTCTCGTTTCAACCTCCAGACGATCGAAGAAGAGGTGGACGATGACGAAGATAAGAAGGTAGAGCCAAATCTTACTTCAATTTCAAACTCGTACAAGCTTCTGGAATCGTCTGGGTCGGATAAAGACGAAAGGGATTACTCGGACAATCAAAGGAAGAAGAAGAAGAACAAAAAGAAGAAGAGAAAGCGAGAGAGAGATGATGAGGATGATAATATCACGCCTTATGCGTTTGGTACTCGGAAGTCTAGCGTACGTGCTTGGACCAACTCTGAGACCAAACCCTCCAAGGATTATTACTTTGATTCTCGTGGTGACCCTGATAACTTGGCCTTTGGCTGCTTGTACAGGATGGATATTGTGAAGTATAAGCTTGATGATGCTGTGAAAAGTAGAGAGATTCATCTCCAAGTGTATTCTCGATTGAGTAATAGGTGCTTGCTTATGAGAGGAGAGCTTGATGTTGATGGATTAGGTGGTAGGCTTAAATCTAGTGGGCGCTATTGGTCAGCCAAGTATTCAGTGATTGAACGACACAGAAGTACAAAGCGCATTCGGGTTGTTGCACCAAAGAAGCATGTGCAAGTTACGCTTGATGATTTCATCCCATTATTGGATGAAGATGAGAATGATCACAATCTTTCAGGAACTTCTGTAGTTGAGGAATCATGGGAAGATGAGATACTGCGGAAGACAAGAGATTTCAATAAAATGACTAGGGAGCTGCCCCATAATGTGAGAGTATGGCTTGATTTTGCTAAATTTCAAGACAAGGTAGCCAGTATGCAACCACAAAAAGGTGCACGTTTGCAGACACTTGAGAAGAAAATTAGTATATTAGAGAAGGCTACTGAGCTGAATCCTGAAGATGAAGATTTATTGCTTTACCTTCTAAAGGCTTATCAGGGCAGGGATAGTGTAGATGTTGTCATTGGTAGATGGGAGAAGATGCTGATGCAACATTCAGGAAGTTACAAATTGTGGAGGGAGTTTTTGCGTTTCGTTCAAGGGGAGTTCACCACGTTTAAAGTGTCTGAACTCCGAAGGATGTATGCCCATGCAATTCAAGCTCTTTCTGCTGCATCCAGCTCGAGGCTTAGGCAGGCTCGTCCAGCTGTGGAACTGCCTACTCTTGATGCTGCAGATGTTGAACTTGAGCTGGGCATTGTTGATATATTTCTCAGTTTGTGTAGGTTTGAGTGGCAAGCAGGTTATCATGAGTTAGCTACTGCACTTTTTCAGGCTGAAATGGAATATAGTTTGTTTTGTCCTCCATTACAGCTTACTGAACAGAGCAAAAAAAGGTTGTTTGACCATTTTTGGACTAGTAGCGGTATGAGAATCGGAGAAGATGGGGCTCTTGGTTGGTCCACGTGGCTGGAAAAAGATGAAGAAAACAGGCAAAAGCTACAGCAAGAAATGTTGCTAAAGGAGGTTAAACAAGGTGGTTGGACAGGGTGGTTTATTCCACCCTCTAAAGACAAGGAGAATTTAACTAATTTAGAGAATGATGACATCGCAGATGTTGCTTTAGAGGATATGGAAGAACAAAAAGAGGATCAGGATGTGAGGCTAGAAGAAGATGATCATGCTCTATTGAGGATGCTGGGTATTGATGTTGATGCTGAAGCTAGTAGAGAGGTCCATGAAACAAGAACATGGGTTAGATGGTCAGAAGAGGAGTTGTCAAGAGACCGTGACCAATGGATGCCTGTTCATCTTATATCTGGGATTTCTCATAGCAAGGAGAACAAAGAAGAAGCAGACGAGCAACTCTCAAGAGTCATATTGTTTGAAGATGTTAGTGAATATATTTTCTCATTGAGCACCACTGAGGCTCGTTTATCACTGGTTCTGCAGTTCATTGATTTCTTTGGTGGACCAACATCTCAGTGTATCTGCACCAACTCTTCTAGTTGGAGTGAGAAAGTACTAAGTTTGGACTCTTTGCCAGACTCTATCCTACAGCACCTGAAAAGAGTTCATTCTTGTCATTTTGAAAGTAGCACAAGCTTCCCTAGTTTGGAAAATTTGCTTCACTGTCCAGACAGCCTCACAAGGATGGAAAAAATGAAGTTTCTGCGAAATGCTACCCTCTTATGTTTAAAAGTCTTCCCTCGAGATTACAAGATAGAAGAGGCTACTCTTATTGCTGAGGAGCAATCTGTTGGGAACATAAATAAACCAAAACTTTCAACTATGCCTTCTCAAGCGCTTGCAAAGCGCCTCTTGAAAAGTGATAGACAGGATGTACTACTGTGTGGAGTTTACGCTCGAAGGGAGGCTGCTTTTGGAAATTTTGAGCATGCAAGAAAAGTGTTTGATATGGCCTTATCTTCTATTAATGGGCTGCCCTTGGAAACTAAGTCAATATCTGCGCCCATCCTTACTTTCTGGTACTCCGAAATGGAACTTGCTGATGGCTCCGGCATTGAATCAGAATCTAAGCTACGTGCCATACACATATTATCTTGCTTGGGAAGCGGAATTCCTTACAGCCCATATGAAGGACGCCAATCAAGCACACAATTGCTCAGGGCACACCAGGGATTCAAAGATCGGATATATACCCTAAGTTCATTGCTGACACGACGTGCTATAGATGATAGTTATATTGCTCTTGTTTGTTCAGCTGCTTTATTTGAAGAGTTGACGACAGGATGGGTTGAGGCAGTTAAACTCCTATCTGATGTATTCTCTATGGTGCTTCCAGAGAGAAAGAGTCAAAGTTACCAGCTTGAACTTTTATTCAACTTCCATGTGAGAATGCTTCAGAGACATCATCGTGAAGCAAAGCCATCACAATTATTGCAGTTTGTGTCAGTAGGACTGCATACTTATCCCTGCAGTCCAGAACTGTTCTCCTCTCTGGTGTTGCTAAGCCATTTGTATATAGTTCCCAACAATCTTCGGCGGATCTTTGATGAACTCAATCAGAAGAAACCATCAGTTGTCCTTTACTTGTTCTCTCTGTCATATGAGCTGAGTAGGGGAGCTTCACCACATAGGATACATGGATTGTTTGAGAGAGCGCTGGCTAATGACAAGCTAAATTCCTCAGTTATATTGTGGCGTTGCTATATTGCATATGAGATAGATAGAGGAAATCTTTCTGCTGCAAGAAAAATATTTTTCCGAGCTATTCATGCATGTCCATGGTCAAAGCTGCTGTGGCTTGATGGTTTCCAGAAGTTGAATAACGTTCTGAGTGCAAAAGAGCTGTTTGATCTCCAAGAAGTGATGCGGGACAAGGAGCTCAACTTAAGAACAGATATCTATGAGATTCTTCTACAGGACGAACTTAATCCAGTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_80609.p1 GENE.R_Transcript_80609~~R_Transcript_80609.p1 ORF type:complete len:1171 (+),score=264.75,NRDE-2|PF08424.6|6.6e+02,NRDE-2|PF08424.6|3.1e-88,NRDE-2|PF08424.6|5.9e+02 R_Transcript_80609:139-3651(+)
MHPDPAMEETEAPPIDEAAGAPENQQTSTLLSLFPVSNTTTVATTSPQWLRNSSFTTDLSVVNDAVSSRFNLQTIEEEVDDDEDKKVEPNLTSISNSYKLLESSGSDKDERDYSDNQRKKKKNKKKKRKRERDDEDDNITPYAFGTRKSSVRAWTNSETKPSKDYYFDSRGDPDNLAFGCLYRMDIVKYKLDDAVKSREIHLQVYSRLSNRCLLMRGELDVDGLGGRLKSSGRYWSAKYSVIERHRSTKRIRVVAPKKHVQVTLDDFIPLLDEDENDHNLSGTSVVEESWEDEILRKTRDFNKMTRELPHNVRVWLDFAKFQDKVASMQPQKGARLQTLEKKISILEKATELNPEDEDLLLYLLKAYQGRDSVDVVIGRWEKMLMQHSGSYKLWREFLRFVQGEFTTFKVSELRRMYAHAIQALSAASSSRLRQARPAVELPTLDAADVELELGIVDIFLSLCRFEWQAGYHELATALFQAEMEYSLFCPPLQLTEQSKKRLFDHFWTSSGMRIGEDGALGWSTWLEKDEENRQKLQQEMLLKEVKQGGWTGWFIPPSKDKENLTNLENDDIADVALEDMEEQKEDQDVRLEEDDHALLRMLGIDVDAEASREVHETRTWVRWSEEELSRDRDQWMPVHLISGISHSKENKEEADEQLSRVILFEDVSEYIFSLSTTEARLSLVLQFIDFFGGPTSQCICTNSSSWSEKVLSLDSLPDSILQHLKRVHSCHFESSTSFPSLENLLHCPDSLTRMEKMKFLRNATLLCLKVFPRDYKIEEATLIAEEQSVGNINKPKLSTMPSQALAKRLLKSDRQDVLLCGVYARREAAFGNFEHARKVFDMALSSINGLPLETKSISAPILTFWYSEMELADGSGIESESKLRAIHILSCLGSGIPYSPYEGRQSSTQLLRAHQGFKDRIYTLSSLLTRRAIDDSYIALVCSAALFEELTTGWVEAVKLLSDVFSMVLPERKSQSYQLELLFNFHVRMLQRHHREAKPSQLLQFVSVGLHTYPCSPELFSSLVLLSHLYIVPNNLRRIFDELNQKKPSVVLYLFSLSYELSRGASPHRIHGLFERALANDKLNSSVILWRCYIAYEIDRGNLSAARKIFFRAIHACPWSKLLWLDGFQKLNNVLSAKELFDLQEVMRDKELNLRTDIYEILLQDELNPV*

Click here to download the sequence:
Link to NCBI Protein BLAST