Transcript Information: R_Transcript_80610.p1


Annotated TAIR IDAT3G17740.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1740 (InterPro:IPR013633); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G17712.1); Has 409 Blast hits to 335 proteins in 133 species: Archae - 1; Bacteria - 0; Metazoa - 140; Fungi - 188; Plants - 42; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:6068003-6072814 | Reverse length=1149
E-Value5E-91
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.076372221567861
Replicate 20
Replicate 30.095844090360471
Condition 2: 8 Hour
Replicate 10.1024513177709
Replicate 20.42102078780475
Replicate 30.18987040397894
Condition 3: 24 Hour
Replicate 10.096057770827214
Replicate 20.32298496283272
Replicate 30.091580354338483


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_80610.p1 GENE.R_Transcript_80610~~R_Transcript_80610.p1 ORF type:complete len:478 (+),score=102.87,NRDE-2|PF08424.6|2.1e+02,NRDE-2|PF08424.6|8.7e-39 R_Transcript_80610:139-1572(+)
ATGCACCCAGACCCAGCAATGGAAGAAACCGAGGCCCCGCCGATCGACGAAGCAGCAGGTGCTCCAGAAAACCAACAGACATCAACGCTACTCTCTCTCTTCCCCGTATCGAATACTACCACCGTAGCCACCACAAGTCCTCAGTGGCTACGCAATTCCAGCTTCACTACTGACCTCTCTGTCGTGAACGACGCCGTTTCCTCTCGTTTCAACCTCCAGACGATCGAAGAAGAGGTGGACGATGACGAAGATAAGAAGGTAGAGCCAAATCTTACTTCAATTTCAAACTCGTACAAGCTTCTGGAATCGTCTGGGTCGGATAAAGACGAAAGGGATTACTCGGACAATCAAAGGAAGAAGAAGAAGAACAAAAAGAAGAAGAGAAAGCGAGAGAGAGATGATGAGGATGATAATATCACGCCTTATGCGTTTGGTACTCGGAAGTCTAGCGTACGTGCTTGGACCAACTCTGAGACCAAACCCTCCAAGGATTATTACTTTGATTCTCGTGGTGACCCTGATAACTTGGCCTTTGGCTGCTTGTACAGGATGGATATTGTGAAGTATAAGCTTGATGATGCTGTGAAAAGTAGAGAGATTCATCTCCAAGTGTATTCTCGATTGAGTAATAGGTGCTTGCTTATGAGAGGAGAGCTTGATGTTGATGGATTAGGTGGTAGGCTTAAATCTAGTGGGCGCTATTGGTCAGCCAAGTATTCAGTGATTGAACGACACAGAAGTACAAAGCGCATTCGGGTTGTTGCACCAAAGAAGCATGTGCAAGTTACGCTTGATGATTTCATCCCATTATTGGATGAAGATGAGAATGATCACAATCTTTCAGGAACTTCTGTAGTTGAGGAATCATGGGAAGATGAGATACTGCGGAAGACAAGAGATTTCAATAAAATGACTAGGGAGCTGCCCCATAATGTGAGAGTATGGCTTGATTTTGCTAAATTTCAAGACAAGGTAGCCAGTATGCAACCACAAAAAGGTGCACGTTTGCAGACACTTGAGAAGAAAATTAGTATATTAGAGAAGGCTACTGAGCTGAATCCTGAAGATGAAGATTTATTGCTTTACCTTCTAAAGGCTTATCAGGGCAGGGATAGTGTAGATGTTGTCATTGGTAGATGGGAGAAGATGCTGATGCAACATTCAGGAAGTTACAAATTGTGGAGGGAGTTTTTGCGTTTCGTTCAAGGGGAGTTCACCACGTTTAAAGTGTCTGAACTCCGAAGGATGTATGCCCATGCAATTCAAGCTCTTTCTGCTGCATCCAGCTCGAGGCTTAGGCAGGTCCTTACAACCACTTTCTGCCAGAATGTCCATTTAGATGTGCACTTGTGGTGGTTCTGTTATGAACTTTTGATATCTGTTCTCTTTTTCGGTGGAGTCGCGTTTATATATTTGCTATTCATGCTATTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_80610.p1 GENE.R_Transcript_80610~~R_Transcript_80610.p1 ORF type:complete len:478 (+),score=102.87,NRDE-2|PF08424.6|2.1e+02,NRDE-2|PF08424.6|8.7e-39 R_Transcript_80610:139-1572(+)
MHPDPAMEETEAPPIDEAAGAPENQQTSTLLSLFPVSNTTTVATTSPQWLRNSSFTTDLSVVNDAVSSRFNLQTIEEEVDDDEDKKVEPNLTSISNSYKLLESSGSDKDERDYSDNQRKKKKNKKKKRKRERDDEDDNITPYAFGTRKSSVRAWTNSETKPSKDYYFDSRGDPDNLAFGCLYRMDIVKYKLDDAVKSREIHLQVYSRLSNRCLLMRGELDVDGLGGRLKSSGRYWSAKYSVIERHRSTKRIRVVAPKKHVQVTLDDFIPLLDEDENDHNLSGTSVVEESWEDEILRKTRDFNKMTRELPHNVRVWLDFAKFQDKVASMQPQKGARLQTLEKKISILEKATELNPEDEDLLLYLLKAYQGRDSVDVVIGRWEKMLMQHSGSYKLWREFLRFVQGEFTTFKVSELRRMYAHAIQALSAASSSRLRQVLTTTFCQNVHLDVHLWWFCYELLISVLFFGGVAFIYLLFMLL*

Click here to download the sequence:
Link to NCBI Protein BLAST