Transcript Information: R_Transcript_80653.p1


Annotated TAIR IDAT3G05710.2
Annotated Gene Namesyntaxin of plants 43
Annotated Gene Symbol(s)SYP43, ATSYP43
Annotation TypeOrtholog
Chromosome Positionchr3:1685262-1687229 | Forward length=331
E-Value1.5E-129
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.9421374426134
Replicate 24.472136189753
Replicate 34.2174859834071
Condition 2: 8 Hour
Replicate 13.4474683499732
Replicate 22.9061073873021
Replicate 33.2764640109002
Condition 3: 24 Hour
Replicate 14.8899300593305
Replicate 23.503362423052
Replicate 33.8718322370324


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_80653.p1 GENE.R_Transcript_80653~~R_Transcript_80653.p1 ORF type:3prime_partial len:277 (+),score=52.04 R_Transcript_80653:361-1188(+)
ATGGCGACGAGAAACAGGACGATCGTGTTCAAGAAGTACAGAGATGCGTTCAAGAGCGTACGGGCCCCCACTTCGGACGGAATTGCTACTGCAACGACGTCGTCTTCATCATCTTCTTCTAAGCAAAAAGGGATTGAATTAGCTGCTACTTCTCTCCTTCATCCTTCTACTCGTCGCTATGCTCCTCTTAGTACCGAAGACCCCGTCTCTTCCAGTAACGGTGCCGTGGCAGTGGGTTTACCACCAGCTTGGGTAGATATATCTGAAGATGTGGCGTCAAATATACAACGTGCACGTTCAAAGATGGCTGAACTAGCAAAGGCCCATGCAAAAGCATTAATGCCGTCATTTGGAGATGGCAAAGAAGACCAGAACAGGATTGAGACCCTTACACATGAAATAACTGAACTGATTAAGAGATCAGAGAAGAAATTGCAAAGAATTTCTGCTGTTGGGTCTTCGGAGGACGCAAATGTTAGAAAGAATGTGCAGCGTTCACTTGCAACTGATCTTCAAAACTTGTCAATGGAACTCAGGAAGAAACAATCAGCATATTTGAAGCGACTTCGGCAGCAAAAAGAGGGCCCAGATGGAGTTGACTTGGAAATGAATATAAAAGGAAACCGATCACAAGTAGAAGATGATTATTTGGATGACCAGGGATTTAGTCAGCATCAGCTAACTAGAATAAAGCAAAGTGAAGCACTCACAGTAGAGAGGGAGCGAGAGATCCAACAGGTTGTGGAATCTGTGAATGAGCTTGCCCAAGTCATGAAGGACCTCTCGGTATTGGTCATCGACCAGGGTACGATTGTGGATAGAATAGAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_80653.p1 GENE.R_Transcript_80653~~R_Transcript_80653.p1 ORF type:3prime_partial len:277 (+),score=52.04 R_Transcript_80653:361-1188(+)
MATRNRTIVFKKYRDAFKSVRAPTSDGIATATTSSSSSSSKQKGIELAATSLLHPSTRRYAPLSTEDPVSSSNGAVAVGLPPAWVDISEDVASNIQRARSKMAELAKAHAKALMPSFGDGKEDQNRIETLTHEITELIKRSEKKLQRISAVGSSEDANVRKNVQRSLATDLQNLSMELRKKQSAYLKRLRQQKEGPDGVDLEMNIKGNRSQVEDDYLDDQGFSQHQLTRIKQSEALTVEREREIQQVVESVNELAQVMKDLSVLVIDQGTIVDRID

Click here to download the sequence:
Link to NCBI Protein BLAST