Transcript Information: R_Transcript_80683.p1


Annotated TAIR IDAT5G24930.1
Annotated Gene NameCONSTANS-like 4
Annotated Gene Symbol(s)ATCOL4, COL4
Annotation TypeOrtholog
Chromosome Positionchr5:8589325-8590949 | Forward length=406
E-Value7.4E-97
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1104.8338048484
Replicate 276.486522945086
Replicate 388.839357978729
Condition 2: 8 Hour
Replicate 154.607365477586
Replicate 243.420336696905
Replicate 338.848288338341
Condition 3: 24 Hour
Replicate 152.900132527329
Replicate 238.684223927124
Replicate 355.298301523775


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_80683.p1 GENE.R_Transcript_80683~~R_Transcript_80683.p1 ORF type:complete len:378 (+),score=30.92,CCT|PF06203.10|6e-18,zf-B_box|PF00643.20|5.2e-05,zf-B_box|PF00643.20|3.7e-06,zf-B_box|PF00643.20|1.6e+04 R_Transcript_80683:598-1731(+)
ATGGGGAGGGGATTAATGGCAGCAAAGCTATGTGACTCATGCAAGTCAGCAACAGCCACGGTGTTCTGCCGGGCTGACTCAGCATACCTGTGCATGCCATGTGACGGCAAAATCCACGCTGCCAACAAACTCGCCTCCCGCCACGCGCGTGTTTGGGTCTGTGAGGTCTGTGAGCACGCGCCGGCCAGTGTCACGTGCAAGGCTGACGCTGCTCATCTCTGTGCCACGTGCGATGACGACATCCACTCCGCCAACCCTCTCGCTCGCCGCCATGAGCGCGTCCCTCTTGCTCCTTTTTACGACTCCTCCGCCGCCGCTGCTGCCGCCGAATCTATTCCCTCCGCCGCCGCCGCCGTCAAGTCCGCCGCCATTAGCAAGCTCTTTGGTGATGACTACTACTCCGATGCTGACGAGGCCGAGGCCGCCTCGTGGCTGTTACCGAACCCCAACCCCAACCCCAACCCGAATAACAACAACACCAAGTCGGATCCGGATGATCAGAAGTCGATTGATTACCTGTTTGCTGGTGGATGTCGTGGCGAGGCTGATGACATTGACCCGTACTTGGATCTGGATTTCAGCTCGGATCCGAAACCCGACCCGAGTGCTGACGGTGTGGTTCCGGATCCGGATCATAAACAAACTCAACACCACCATCAAATATCTCAGTCTTTGTACTCCATGCCTGGTTCTTACCACAGCAATCACTTTGATGGCGGCTTTGATAATACCAATAATTCTGGAGCTACTTGCAAGCCTTTTTCTCTCTCCTCTTACAACGCTCATCCGCCTTCTCTCAGCCACAGCGTATCATCATCATCGCTGGATTTCGGAGTGGTACCAGATGCAAGTGCGATGGCTGACGTGGCATCAACTGGATTTGAGAAGCAGCAACAGATGAAGATGGTAGGAATGGATAGAGAGGCAAGGGTTTTGAGGTACAGAGAGAAGAGGAAGAACAGAAAGTTCGAGAAGACTATTCGTTACGCTTCTCGGAAAGCCTACGCCGAGACCAGACCCCGTATTAAAGGCCGCTTCGCCAAACGCTCCGACGTCGAAGCCGAGGTTTCCGCCGCCTCCGTCGACGGCCTCTTCGCCTCCGATCCCGGCTACGGTGTTGTGCCATCCTTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_80683.p1 GENE.R_Transcript_80683~~R_Transcript_80683.p1 ORF type:complete len:378 (+),score=30.92,CCT|PF06203.10|6e-18,zf-B_box|PF00643.20|5.2e-05,zf-B_box|PF00643.20|3.7e-06,zf-B_box|PF00643.20|1.6e+04 R_Transcript_80683:598-1731(+)
MGRGLMAAKLCDSCKSATATVFCRADSAYLCMPCDGKIHAANKLASRHARVWVCEVCEHAPASVTCKADAAHLCATCDDDIHSANPLARRHERVPLAPFYDSSAAAAAAESIPSAAAAVKSAAISKLFGDDYYSDADEAEAASWLLPNPNPNPNPNNNNTKSDPDDQKSIDYLFAGGCRGEADDIDPYLDLDFSSDPKPDPSADGVVPDPDHKQTQHHHQISQSLYSMPGSYHSNHFDGGFDNTNNSGATCKPFSLSSYNAHPPSLSHSVSSSSLDFGVVPDASAMADVASTGFEKQQQMKMVGMDREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRSDVEAEVSAASVDGLFASDPGYGVVPSF*

Click here to download the sequence:
Link to NCBI Protein BLAST