Transcript Information: R_Transcript_80702.p1


Annotated TAIR IDAT1G54120.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G14060.1); Has 23 Blast hits to 23 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:20207078-20207452 | Forward length=124
E-Value1E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 168.055741837792
Replicate 2100.81005166766
Replicate 392.688852127478
Condition 2: 8 Hour
Replicate 140.70166954807
Replicate 249.9047495396
Replicate 348.444364768317
Condition 3: 24 Hour
Replicate 143.178922203099
Replicate 241.6274753895
Replicate 339.426858773749


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_80702.p1 GENE.R_Transcript_80702~~R_Transcript_80702.p1 ORF type:complete len:151 (+),score=9.53 R_Transcript_80702:43-453(+)
ATGGCATCATTTTACTCGGATGCGTTTCTCCACAAGCAACCCCTAGCCACTCATTCCACCACCTTGTCATGGCCAAGCCGCCCCAAGATCCGCGTACCAAGGCGGGGTCGGCGGTTGCCAATAGTGCACTTAGGTGGCCGGAAAAAGCACCGGCGAGGTTTCTTCTTGGCCCGGTTTCTCCGGCGTATTCGTCTTAGATGGCTAAGACTTCAATACTCTTGCATTTTAAGGAAGCTTAAGCAATATTATAGATCACTAATCAAAGATTTAATCGAAGCTAGTGCATCAGTTGAGGCTTATCAACAAAGAGTGCTCATGGAGAGCTCTCTAGCTTTGCCTGTCATGGGACTCTCTCTTTCAAACTACCATGGTGGTGCCACTGTGAGAAGCCCTAAATCCGTCTTCATGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_80702.p1 GENE.R_Transcript_80702~~R_Transcript_80702.p1 ORF type:complete len:151 (+),score=9.53 R_Transcript_80702:43-453(+)
MASFYSDAFLHKQPLATHSTTLSWPSRPKIRVPRRGRRLPIVHLGGRKKHRRGFFLARFLRRIRLRWLRLQYSCILRKLKQYYRSLIKDLIEASASVEAYQQRVLMESSLALPVMGLSLSNYHGGATVRSPKSVFM*

Click here to download the sequence:
Link to NCBI Protein BLAST