Transcript Information: R_Transcript_80736.p1


Annotated TAIR IDAT1G76050.2
Annotated Gene NamePseudouridine synthase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:28540858-28542826 | Forward length=430
E-Value1.9E-168
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.4758882864156
Replicate 23.6860171841945
Replicate 35.3449054391022
Condition 2: 8 Hour
Replicate 15.0604120890973
Replicate 25.0187757021328
Replicate 36.1312106984418
Condition 3: 24 Hour
Replicate 16.0710645779929
Replicate 24.7051218966565
Replicate 35.6421638748446


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_80736.p1 GENE.R_Transcript_80736~~R_Transcript_80736.p1 ORF type:5prime_partial len:450 (+),score=66.72,PseudoU_synth_2|PF00849.18|1.5e-27,S4|PF01479.21|1.1e-09 R_Transcript_80736:2-1351(+)
GACCAACTGTCAAGTCTGTATTTCCAGGCTCCAGCGAAGAACCGCAAAAGTATGCTAGGCCTGAATTCATCATCATATCCAATTCTCCATTTCCCTCCTAAAAACCCTGAAATTCGAATTAGGGTTTCGAGGCTCGTCAAAGCCTTTTCCTCTTCATCCTCATCCATTGACTACCGAACCGATGATGAGAGGATTCCCGGTGATGGGCGAACAACAAGCTACGAAGGAGTGAAATTGCAGGAAAAAGTTGAACAGTTTTCTTGTTCAGGAAAAACAAGGCTTGACGCTTGGATTTCTTCCAAAATTACCGGCATTAGCAGAGCTAGAGTTCAGTCCAGTATTCGTGCTGGTCTTGTCACTGTTAATGGCCGAATTGTCGATAAGGTTTCATATGCTGTTAGAACCGGAGATGAAGTTAACTGCACTATAGCAAAGTTGCAACCCTTGAGGGCTGAGGCAGAGGAAATTCCCTTGGACATAAAGTACGAGGATGAGCATGTGTTAGTTGTGAACAAACCTCCACATATGGTTGTCCATCCTGCACCTGGAAATGCACGGGGAACCCTTGTTAATGCTGTATTAAACCACTGCAGTCTTCCCAATGTTGCAGTAACTGATAATGGATGGAATTCTGAGGCAGAGGATATTTCAGATAACGATGTCCAAATAAATGTAGATCCTACAGATCAATTTTCCACCGAAGAGGCATTTTCCTTGTCTATCCGTCCAGGCATAGTGCACAGGTTAGACAAAGGCACGAGTGGATTGCTGGTGGTCGCCAAGGATGAATATTCTCATAATCATTTGGCAGAACAGTTCAAGTCCCACACAATCAGTAGAGTTTATATAAGTCTCAACACAGGAGTGCCTACCACTACTGCTGGACGTGTTGAGGTTCCAATAGGCCGAGACACAAATAACCGAATTCGGATGACTGCTGTTGGACACAATCATTCAGGACCAGTACGACATGCTGCCAGTAGGTACAAAGTGCTTGAAGTACTAGGCAATGGGGGTGCAGCCGTGGTTGAATGGAGACTAGAAACTGGACGTACTCATCAGATCCGAGTCCATGCAAAGTATATCGGTATTCCTCTACTGGGAGATGATTTATATGGAGGGACTAAAGACGTGGCATTGTCGCTGCTTCGTCCAAGAACTTCTGCCAACTACCATGTTCAGCTTGTTAATCTACTCTCCAGCATAGAAAGGCCTTGCCTCCATGCTATGGTTCTTGGGTTCAAGCATCCATGCACTGGCAAGTATATGCATTTCTCATGTCCTCCACCTGCTGATTTTGCTGGAGTTTTGAGTCAACTACAACGCCTTCCCAAACAGAAGGGTGCCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_80736.p1 GENE.R_Transcript_80736~~R_Transcript_80736.p1 ORF type:5prime_partial len:450 (+),score=66.72,PseudoU_synth_2|PF00849.18|1.5e-27,S4|PF01479.21|1.1e-09 R_Transcript_80736:2-1351(+)
DQLSSLYFQAPAKNRKSMLGLNSSSYPILHFPPKNPEIRIRVSRLVKAFSSSSSSIDYRTDDERIPGDGRTTSYEGVKLQEKVEQFSCSGKTRLDAWISSKITGISRARVQSSIRAGLVTVNGRIVDKVSYAVRTGDEVNCTIAKLQPLRAEAEEIPLDIKYEDEHVLVVNKPPHMVVHPAPGNARGTLVNAVLNHCSLPNVAVTDNGWNSEAEDISDNDVQINVDPTDQFSTEEAFSLSIRPGIVHRLDKGTSGLLVVAKDEYSHNHLAEQFKSHTISRVYISLNTGVPTTTAGRVEVPIGRDTNNRIRMTAVGHNHSGPVRHAASRYKVLEVLGNGGAAVVEWRLETGRTHQIRVHAKYIGIPLLGDDLYGGTKDVALSLLRPRTSANYHVQLVNLLSSIERPCLHAMVLGFKHPCTGKYMHFSCPPPADFAGVLSQLQRLPKQKGA*

Click here to download the sequence:
Link to NCBI Protein BLAST