Transcript Information: R_Transcript_80903.p1


Annotated TAIR IDAT3G15430.1
Annotated Gene NameRegulator of chromosome condensation (RCC1) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:5209408-5211562 | Forward length=488
E-Value1.2E-258
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 131.349089444588
Replicate 217.11283834743
Replicate 327.56257857098
Condition 2: 8 Hour
Replicate 116.821590146685
Replicate 218.497721360493
Replicate 327.707031658355
Condition 3: 24 Hour
Replicate 125.99085086551
Replicate 220.755253793368
Replicate 325.179757830862


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_80903.p1 GENE.R_Transcript_80903~~R_Transcript_80903.p1 ORF type:complete len:492 (+),score=95.98,RCC1|PF00415.14|4.8e+02,RCC1|PF00415.14|0.00048,RCC1|PF00415.14|4.3e-07,RCC1|PF00415.14|4.2e-13,RCC1|PF00415.14|1.2e-11,RCC1|PF00415.14|4.7e-08,RCC1|PF00415.14|1.3e-05,RCC1|PF00415.14|0.0045,RCC1_2|PF13540.2|0.11,RCC1_2|PF13540.2|2.6e-05,RCC1_2|PF13540.2|1.3e-07,RCC1_2|PF13540.2|1.1e-06,RCC1_2|PF13540.2|4.2e-05,RCC1_2|PF13540.2|1.1,RCC1_2|PF13540.2|2e-06 R_Transcript_80903:557-2032(+)
ATGGGTTTTAAAATTGATGAGTTGCCCTCACATTTGGTGTTGGAGATATTGACTTCAGGTAGATTGAGTGCTGTTGATCTGGTGTGTGTTGAATTATCTTCATCAAGTATATTTGGGGGTTTGAATAATCAAGGGCTTTTGTTTCCTTTGAAATTCAAGTCATTAGTGGATTTAGCAGCTTATCAGCTATGTGGGTCTCATCCCATTTATGGTTCCATGAGTTTGGAAGCTCAAAAAGCTCTCTTTGATCGGTGTCATGGGAATTGGAAAAGGGTTTTGAGGTTCTTACAGTCTGTTGAACAAGCTTCTGACATTGTTGAGACCTCTTCTGGCAATATGCAAATAAAGGCGGGCAGGTATCACACTTTGCTTGTCAGCAATTCATCAGTTTACTCTTGTGGATCCAGCTTGTGCGGTGTTCTTGGCCATGGTTCGGAAACGACACAGTGTGTATCATTTAGCCGGATCATTTTCCCTTCTTTCTCTCCTGTTGTCCAAGTTTCTGCTTCACACAATCATGCCGCTTTTGTCACGCAGTCTGGAGAGGTCTTCACTTGCGGAGACAATTCCTCTTTTTGCTGTGGACATAAAGATACAGGTCGACCTATTTTCCGGCCTAGACTTGTTGAGGCACTAAATGGTATTCCCTGTAAGCAGGTTGCTGCGGGACTTAGTTTTACCATGTTCCTCACTAGAGAAGGCCATGTATATACCTGTGGAACAAACACTCATGGGCAGCTTGGTCATGGAGACACCCTGGATCGACCAATGCCAACACTTGTGGAGCTGCTTCAGGGTGTTGGCCCTGTAGTTCAAATTGCTGCTGGTCCAAGCTATGCTTTAGCTGTGACTTCTGATGGGACTGTTTACTCATTTGGGTCAGGTACCAACTTTTGTCTAGGTCATGGTGAGCAGCATAATGAGCATCAACCTCGGGCCATCCTGTCTTTTAGAAGAAAGGGTATCAATGTGGTTCGTGTCTCTGCTGGTGATGAGCATGTTGTGGCTCTTGACTCTTGTGGATATGTATACACTTGGGGCAAAGGCTACTGTGGCGCATTGGGCCATGGAGATGAAATTGACAAGACTACTCCGTTGCTTTTGAGCAGCCTGAAGAGCCAAATTGCTGTGCAGGTTTGTGCTAGTAAAAGGAAAACTTTTGTGCTAGTTGACACTGGCTCTGTTTACGCTTGTGGTTGGATGGGTTTCGGCAGCCTTGGGTTTACAGACAGGGGAGTATCTGATAAAGTCACTAAGCCCCGAGTTCTTGACAGCTTGAGAGCTCATTATATTTCTCAGATTAGCACTGGCCTTTATCACACTGTTGTGATTACAAGCAGAGGTCAGATTTTCGGCTTTGGGGACAATGAAAGAGCTCAACTTGGACATGACTCCTTGAGAGGTTGCCTCGAACCCACTGAAATATTCATCGATGAGATGGCGGACAATGATGCTGCTATCACAGAAAGTACATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_80903.p1 GENE.R_Transcript_80903~~R_Transcript_80903.p1 ORF type:complete len:492 (+),score=95.98,RCC1|PF00415.14|4.8e+02,RCC1|PF00415.14|0.00048,RCC1|PF00415.14|4.3e-07,RCC1|PF00415.14|4.2e-13,RCC1|PF00415.14|1.2e-11,RCC1|PF00415.14|4.7e-08,RCC1|PF00415.14|1.3e-05,RCC1|PF00415.14|0.0045,RCC1_2|PF13540.2|0.11,RCC1_2|PF13540.2|2.6e-05,RCC1_2|PF13540.2|1.3e-07,RCC1_2|PF13540.2|1.1e-06,RCC1_2|PF13540.2|4.2e-05,RCC1_2|PF13540.2|1.1,RCC1_2|PF13540.2|2e-06 R_Transcript_80903:557-2032(+)
MGFKIDELPSHLVLEILTSGRLSAVDLVCVELSSSSIFGGLNNQGLLFPLKFKSLVDLAAYQLCGSHPIYGSMSLEAQKALFDRCHGNWKRVLRFLQSVEQASDIVETSSGNMQIKAGRYHTLLVSNSSVYSCGSSLCGVLGHGSETTQCVSFSRIIFPSFSPVVQVSASHNHAAFVTQSGEVFTCGDNSSFCCGHKDTGRPIFRPRLVEALNGIPCKQVAAGLSFTMFLTREGHVYTCGTNTHGQLGHGDTLDRPMPTLVELLQGVGPVVQIAAGPSYALAVTSDGTVYSFGSGTNFCLGHGEQHNEHQPRAILSFRRKGINVVRVSAGDEHVVALDSCGYVYTWGKGYCGALGHGDEIDKTTPLLLSSLKSQIAVQVCASKRKTFVLVDTGSVYACGWMGFGSLGFTDRGVSDKVTKPRVLDSLRAHYISQISTGLYHTVVITSRGQIFGFGDNERAQLGHDSLRGCLEPTEIFIDEMADNDAAITEST*

Click here to download the sequence:
Link to NCBI Protein BLAST