Transcript Information: R_Transcript_80925.p1


Annotated TAIR IDAT4G24790.1
Annotated Gene NameAAA-type ATPase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:12778222-12781345 | Forward length=857
E-Value2.3E-239
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.5420351576521
Replicate 24.4624850052269
Replicate 34.8012163032092
Condition 2: 8 Hour
Replicate 14.3647673069526
Replicate 23.5698567483969
Replicate 34.622349423409
Condition 3: 24 Hour
Replicate 18.5445315832787
Replicate 27.0205280503797
Replicate 39.2824447888605


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_80925.p1 GENE.R_Transcript_80925~~R_Transcript_80925.p1 ORF type:complete len:1021 (+),score=178.55,DNA_pol3_delta2|PF13177.2|5.3e-22,DNA_pol3_delta2|PF13177.2|8.8e+03,AAA|PF00004.25|1.1e-08,DNA_pol3_gamma3|PF12169.4|1.5e-06 R_Transcript_80925:456-3518(+)
ATGGACGGGCGGCGGCATTCAGTTGATGTACCCATATCGAAAACCTTGGTGGCACTAAGGAGGGTTAGGTCACTAAGGGATCCATCAACGAATTCAATGAGCAAGTTCTCTGCTCTGGTTGATAATTTGAATTGGGATACCAATTCCTGTAATGGGATTTCTCTGAGGTTTGGGAATGGTTGTCAAGAAGGGATGGCAGGTAACAATGGGTGGGATTTGAGTAAACTTTTGGGTCCTTGTGGAGAACAAGAAGAAATTTCTAAGGATATAGAACTGAATGTATGTTCCCCTAATAAATCTAATTCTAAGTCGAATAGAAGGAAGAATTCTGGGTGTGTTGGAAAATCAGGGTCAAATGCTGCTTTATTGAACAACAGTAAAGAGGATGGTAGCAAATTATTGATTAAGAGGCATTGTAATGACCATAGGGAAAATGGTTTAGAGTTAGCTTGTATCTCCCCTTCCAATGATCAACTTGAAGGTGCGGATTCAAACCATGATTCGACAGTAAGGTCCTCACCTATTGGAGGGAAAATCCATTCATCAAAGCGGAATGGTGGTTACAGGAACTCAAGGCAACTAGGATCAATGGGTGATCTTTTAAGCCGAGTAGGCAGTCCATCAATTTGTGCCAGTGATACTATGTTTGATGGTTCAACTCGTAGCCCATCACTATTTGCTAATTATGAGCTTGAGGCTCTAGATCGAGACTTCCAAGGATGCGGGTTAACCTGCTGCTGGTCAAGAACCCCCAGATATAGAGACTCTAATCTTGGTTCTGAAGGAGAAGAGTACCCATTGATATCAGGTGAAACTGGTGACACTGAAGTGTCTGGACGAAGTAGGAACTGGAAACACATTAACAATGAAATCGTTCCATATTCTGAGAGTCCGAGGAGTCTGAGTCAAAAATTTAGGCCAAAATCGTTTGATGAATTGGTTGGGCAAAGTGTGGCTGCAAGGTCACTTTTAGGTGCCATCTCAAAAGGAAGGATAACTTCTTTCTATCTCTTCCATGGTCCTCGTGGTACTGGCAAGACTTCAGCATCAAGGATTTTTGCTGCTGCATTGAATTGTCTCTCTATGGAGGAACGCAGGCCGTGTGGATCATGCCAGGAATGTACATTGTATTTTGCAGGTAGGAGCAGAGATGTTAAGGAATTGGATTCTGTGAGAATTAACCGTTCGGGGAGGATTCGATCCCTTGTTAAGAATGCAGCTTTACCTCCAGTTTCCTCAAAATTTAAGGTGTTCATTTTGGATGAGTGTCATTTGCTTCGAAGTGATACATGGGCCACTCTTTTGACTAGCCTGGATACCTTCTCTCAACATGTTGTATTTCTTATGATCACTCCAGACCTGGATAAGTTGCCTAGAAGTGTGGTTGCTCGGTCTCAAAGATATCACTTTCCGAAATTAAAGGATATTGATGTTGCAGATAGACTAAAGAAAATTTGTATGGAAGAAGGTTTGGAGTTCGACCAGGCTGCTTTAGACTTCATAGCTGCTAAATCCAATGGTTCGATGCGAGATGCTGAAATGATGCTGGATCAACTTAGTTTGCTCGGCAGCCAGATCACGATGACCTTGGCCTATGAACTTATTGGGACCATTTCAGATGATGAGCTGCTTGATTTACTGGACCTGGCTCTTTCATCTGACACTTCAAATACAGTAAAAAGGGCAAGGGAGCTGATGAGATCGAGGATTGACCCTATGCAACTGATATCCCAACTAGCCAATATCATAATGGATGTTCTTGCAGGGAAATGCCAGGAAGAGGATTCTGAAGTGCGGAGGAACTTTTTCCAAAGACATGCTTCTGAGGCAGATCTGCAGAAGCTTCGTCATGCACTGAAGATACTATCAGAAAGTGAAAAACAGCTCAGAGTGTCAAAAAATCAAACTACTTGGCTTACTGTAGCTCTGCTGCAATTGAACTCTGTGGATTCCTCTTTCTCAGATCCAAATGAGTCAAGGTTGTCTGTCAGAACTGCGAACTCCGAAGCTGCAGATGGTGACTGTTGCAGTACATCATCACCTGGTGAGAGATCAAGACATTTGGGCGCATATGATTCTGTTGATGTTGAATTGCGAAAAATGGTTGCGCAAGGAGAATGTGGAGGTACTCTTGAATCCTTATGGATGAGAGCCACTGATATATGCCAGTCCAATTCGGTTAAGAACTTCCTACGAAAACGAGGGAAGCTGTATTCGGTGTGGATGAAGAAAGATCTGGCAGTGGCTGAATTGGAGTTTGATCATCCTGATTACGCGTCCAAGGCTGAAAAATCCTGGAAAACAATTGCTAGCTCGCTTCAATCTGTTCTAGGATGTAATGTGGAGATTAGGATCAACCTTGCATCTAGTTATGCTAAATCAAAGAGGCCATCTTTCAGCTTGTTTAGTTGTTCCCGCAGAATACAAAAATCACAAACAATGGCTGAAAGCGGGAGTGATCGGTTATCAGATGCCTCTAATTGCACTTCTGACAGAGCTATGATGGGAGACAGGCATGTTGATACTTGTTCGACATGTGGGTCCCAAGTCTCTCATATCTGCAGCCACAGAATGGTCAGTACACTAAGAAACAGTGATGGCAACGCTCTAACTACTGGACGGTCAGGAGCATCAAGTCCTCACAGAGCTTCACAAGAGAGCATATTAAGTGAGCATGGTCTTATGATGGACTCTTCCAAGGAAAAAACATGCAAAATTTTGACCGTTCAAGAAGAGGAGGTTCAACCCAATTGTTTTCCTAAGACTATGAAGCTTAATAAGAAATTCGGTACATCAGAAACTTCTGAAGTGGTCTGCCTAAAGGTTAAGCCGAAGGACAATCTCAGGACAGCATCCTTTGATACGTATATCTGCACTGACTATCCTTACATCTTAAGGAACAACAGCGATGCTTCACGACATGAAGACGGAAAAACAGAAGAATCAAAGTCAAATTGCTGGAGTACGCCGCCCCTTCCAATGAAGAAGGCATGGCAAATGAAGCACCAACGACAAAAACATCATCTCGTAGAATGGGTTCTACCTTGTGCTGCAGCCAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_80925.p1 GENE.R_Transcript_80925~~R_Transcript_80925.p1 ORF type:complete len:1021 (+),score=178.55,DNA_pol3_delta2|PF13177.2|5.3e-22,DNA_pol3_delta2|PF13177.2|8.8e+03,AAA|PF00004.25|1.1e-08,DNA_pol3_gamma3|PF12169.4|1.5e-06 R_Transcript_80925:456-3518(+)
MDGRRHSVDVPISKTLVALRRVRSLRDPSTNSMSKFSALVDNLNWDTNSCNGISLRFGNGCQEGMAGNNGWDLSKLLGPCGEQEEISKDIELNVCSPNKSNSKSNRRKNSGCVGKSGSNAALLNNSKEDGSKLLIKRHCNDHRENGLELACISPSNDQLEGADSNHDSTVRSSPIGGKIHSSKRNGGYRNSRQLGSMGDLLSRVGSPSICASDTMFDGSTRSPSLFANYELEALDRDFQGCGLTCCWSRTPRYRDSNLGSEGEEYPLISGETGDTEVSGRSRNWKHINNEIVPYSESPRSLSQKFRPKSFDELVGQSVAARSLLGAISKGRITSFYLFHGPRGTGKTSASRIFAAALNCLSMEERRPCGSCQECTLYFAGRSRDVKELDSVRINRSGRIRSLVKNAALPPVSSKFKVFILDECHLLRSDTWATLLTSLDTFSQHVVFLMITPDLDKLPRSVVARSQRYHFPKLKDIDVADRLKKICMEEGLEFDQAALDFIAAKSNGSMRDAEMMLDQLSLLGSQITMTLAYELIGTISDDELLDLLDLALSSDTSNTVKRARELMRSRIDPMQLISQLANIIMDVLAGKCQEEDSEVRRNFFQRHASEADLQKLRHALKILSESEKQLRVSKNQTTWLTVALLQLNSVDSSFSDPNESRLSVRTANSEAADGDCCSTSSPGERSRHLGAYDSVDVELRKMVAQGECGGTLESLWMRATDICQSNSVKNFLRKRGKLYSVWMKKDLAVAELEFDHPDYASKAEKSWKTIASSLQSVLGCNVEIRINLASSYAKSKRPSFSLFSCSRRIQKSQTMAESGSDRLSDASNCTSDRAMMGDRHVDTCSTCGSQVSHICSHRMVSTLRNSDGNALTTGRSGASSPHRASQESILSEHGLMMDSSKEKTCKILTVQEEEVQPNCFPKTMKLNKKFGTSETSEVVCLKVKPKDNLRTASFDTYICTDYPYILRNNSDASRHEDGKTEESKSNCWSTPPLPMKKAWQMKHQRQKHHLVEWVLPCAAAK*

Click here to download the sequence:
Link to NCBI Protein BLAST