Transcript Information: R_Transcript_80973.p1


Annotated TAIR IDAT1G71770.1
Annotated Gene Namepoly(A)-binding protein 5
Annotated Gene Symbol(s)PAB5
Annotation TypeHomolog
Chromosome Positionchr1:26990777-26993489 | Reverse length=682
E-Value4E-50
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5925402175258
Replicate 20.98640337526233
Replicate 31.1530237045043
Condition 2: 8 Hour
Replicate 10.82167332037736
Replicate 20.82540167870148
Replicate 31.8273433510457
Condition 3: 24 Hour
Replicate 12.6193471333622
Replicate 22.5163718197303
Replicate 32.4972548971628


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_80973.p1 GENE.R_Transcript_80973~~R_Transcript_80973.p1 ORF type:complete len:298 (+),score=85.52,PABP|PF00658.14|1.6e+03,PABP|PF00658.14|4.1e-26,RRM_1|PF00076.18|8.9e-08,RRM_5|PF13893.2|1.2e-05,RRM_5|PF13893.2|6.6e+03 R_Transcript_80973:821-1714(+)
ATGCTTGATCAACATGGAGTGAGCAAAGGATCTGGTTTTGTTTCATTCTCAACCCCAGAGGAAGCCGCAAGAGCAATAAATGAAATGCATGGTAAGATGATCGGAAAAAAGCCTCTTTATGTTGCTGTAGCTGAACGTAAAGAAGAAAGGAAGGCAAGACTACAGGCTCATTTTGCTCAGGTTCGAGCTCAAGGAGGGATGTCACCTTTGCCCTCAGTGATGCCTGGCTTCCATCCTGGAGCACCCAGGCTTGCACCACAGCAGCTCTTCTTCGGCCAAGGTGCTCCCGGCTTGCTTCACCCTCAGCCTGCAGGATATGGCTTTCAGCAACATATCTTGCCTGGGTTCCGTCCTGCAGGCCCGAACTTTATGATGCCTTACCACCTTCGAAGGCAAGGACAAACTGGACCACGTTTTGGTGGCAGGAGAGGTGGAAATAACTTGCAGCAACATCAGCAGCTTCAGGTGTCAAATCGCAATGGTGGTCAGAATTTCAGATACATGGGTGCCAGGCGCAATGGTATAGATTCCTCTGTGGTCCCTCAAGGACTGATGGGAACAGTAATGCCAGTTCACTTGAATGCAGGAGAAACGGGCAAATCTGGTCCACTATCAATGTCAACACTTGCATCTGCTCTGGCTGCTGCATCTCCAGAGAGCCAAAGAGTGATGCTTGGGGAACAACTGTATCCATTGGTGGAGCGTATCAAGCATGCTAATGCAGGAAAAGTGACTGGCATGCTGCTAGAGATGGATCAGACCGAAGTACTGCACCTCATTGAGGCTCCTGATGCTCTAAAGAAGAAAGTTACCGAGGCCATGAATGTTCTCCACTCTACTCCTTTAGCTTCTGATGTTGGTGACCAGCTTGGAGCTTTGCCACTGGCTGATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_80973.p1 GENE.R_Transcript_80973~~R_Transcript_80973.p1 ORF type:complete len:298 (+),score=85.52,PABP|PF00658.14|1.6e+03,PABP|PF00658.14|4.1e-26,RRM_1|PF00076.18|8.9e-08,RRM_5|PF13893.2|1.2e-05,RRM_5|PF13893.2|6.6e+03 R_Transcript_80973:821-1714(+)
MLDQHGVSKGSGFVSFSTPEEAARAINEMHGKMIGKKPLYVAVAERKEERKARLQAHFAQVRAQGGMSPLPSVMPGFHPGAPRLAPQQLFFGQGAPGLLHPQPAGYGFQQHILPGFRPAGPNFMMPYHLRRQGQTGPRFGGRRGGNNLQQHQQLQVSNRNGGQNFRYMGARRNGIDSSVVPQGLMGTVMPVHLNAGETGKSGPLSMSTLASALAAASPESQRVMLGEQLYPLVERIKHANAGKVTGMLLEMDQTEVLHLIEAPDALKKKVTEAMNVLHSTPLASDVGDQLGALPLAD*

Click here to download the sequence:
Link to NCBI Protein BLAST