Transcript Information: R_Transcript_80984.p2


Annotated TAIR IDAT1G59077.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: B-block binding subunit of TFIIIC (TAIR:AT1G59453.1); Has 63 Blast hits to 58 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 55; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:21810644-21813023 | Reverse length=665
E-Value7E-30
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.20928324586
Replicate 210.85401970673
Replicate 311.065119008311
Condition 2: 8 Hour
Replicate 112.242932473623
Replicate 211.748937916555
Replicate 311.844695065846
Condition 3: 24 Hour
Replicate 113.813595874296
Replicate 214.018173023672
Replicate 311.314830388989


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_80984.p2 GENE.R_Transcript_80984~~R_Transcript_80984.p2 ORF type:complete len:118 (+),score=12.76 R_Transcript_80984:5287-5640(+)
ATGTCAACTGCTTCTTTCCAGCCAATATTGCCTTGGATCAATGGTGATGGAACCATTAATGGAATCGTTTACAGGGGGCTTACACGCCGTATAGTTGGGATTGTTATTCAAAATCCTGGGATACTCGAGGACGATATTCTTAGCCAAATGGAAGTACTAAATCCACAGAGTTGTAGACAGCTGCTGGAGTTGTTGGTGATGGAAAAGCACCTCATTGTGCGAAAAATGATCCAAGGCGTTTCCTCTGGGCCTCCTGCCTTGCTAAAGAGCCTCATGAACAGCCAATTAAAGGAACCTAAATTTATCTGCCGCGAACATTACTTTGCAAATCCCATGAGTGCTTCATTATTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_80984.p2 GENE.R_Transcript_80984~~R_Transcript_80984.p2 ORF type:complete len:118 (+),score=12.76 R_Transcript_80984:5287-5640(+)
MSTASFQPILPWINGDGTINGIVYRGLTRRIVGIVIQNPGILEDDILSQMEVLNPQSCRQLLELLVMEKHLIVRKMIQGVSSGPPALLKSLMNSQLKEPKFICREHYFANPMSASLL*

Click here to download the sequence:
Link to NCBI Protein BLAST