Transcript Information: R_Transcript_81380.p2


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value0.0003
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.43459430844568
Replicate 20.24995595733688
Replicate 30
Condition 2: 8 Hour
Replicate 10.29149839222911
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.27330722890124
Replicate 20
Replicate 30.26056791293925


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_81380.p2 GENE.R_Transcript_81380~~R_Transcript_81380.p2 ORF type:5prime_partial len:84 (-),score=5.78,gag_pre-integrs|PF13976.2|4e-07,gag_pre-integrs|PF13976.2|2.4e+03 R_Transcript_81380:1231-1482(-)
CTTGGTCACATAAGACAAGATAAAATAAATAGACTAGCAAAAGATGGTCTTTTAGATCGTCTCACCAAGGTTAAGTTGCCTAGATGTGAGCCATGCTTAGTTGGCAAAGATAGAAAGAAGCCTTTCCGTAAGACTTCAAGGGCATCTAGTCCCTTAGAGTTAATCCATTCGGATATTTGCGGGCCAATGAATGTCAAAGCACAGCATGGTGGTGTGTACTTTCTCACCCTAATAGATGATTATTCACGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_81380.p2 GENE.R_Transcript_81380~~R_Transcript_81380.p2 ORF type:5prime_partial len:84 (-),score=5.78,gag_pre-integrs|PF13976.2|4e-07,gag_pre-integrs|PF13976.2|2.4e+03 R_Transcript_81380:1231-1482(-)
LGHIRQDKINRLAKDGLLDRLTKVKLPRCEPCLVGKDRKKPFRKTSRASSPLELIHSDICGPMNVKAQHGGVYFLTLIDDYSR*

Click here to download the sequence:
Link to NCBI Protein BLAST