Transcript Information: R_Transcript_81521.p1


Annotated TAIR IDAT3G57790.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:21405387-21407088 | Reverse length=490
E-Value1.1E-238
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.8520755256
Replicate 28.0721070928205
Replicate 39.5284328656264
Condition 2: 8 Hour
Replicate 19.0021562306049
Replicate 211.321370848163
Replicate 39.571542575036
Condition 3: 24 Hour
Replicate 110.321367114976
Replicate 28.1548856402135
Replicate 38.9206191370968


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_81521.p1 GENE.R_Transcript_81521~~R_Transcript_81521.p1 ORF type:complete len:476 (+),score=35.38,Glyco_hydro_28|PF00295.13|7e-25,Pectate_lyase_3|PF12708.3|1.5e-16,Pectate_lyase_3|PF12708.3|30,Pectate_lyase_3|PF12708.3|4.2e+02,Beta_helix|PF13229.2|0.00013,Beta_helix|PF13229.2|0.87,Beta_helix|PF13229.2|2.8e+03 R_Transcript_81521:236-1663(+)
ATGGCAATTTTCTCTCTCCCCTCCATCCTCCAATTCACCACTCTCCTCTCTCTCCTCCAAATCCCTCCCACCCAATCACGCTTCGCCACGTCAACCGGCCCCACACTCCAACTCCCTACAACCACCACGACCACCCACTCAGTGAGAGACTTCGGAGCAACAGGCAACGGCCGCCACTACGACACAAGCCCCATCCAATCAGCGATTGACGCGTGTCCATCGCCATACCCCTGCCACGTGGTATTCCCACCAGGGAAATACTTAACGGCGACAATCCGCCTCAGATCCGGCGTCGTTTTGGTAATACAAGAAGGGGCGGTGATATTAGGGGGGACAAGATTAAAGGATTACCCTGTAGAAGCGGAGAGATGGTACGTTGTGGTTGGGGAGCAGGTGGATAACGTGGGGATCAAAGGAGGAGGGGAGATCAACGGTCAGGGATTGGAGTTTGTGAAGAGGTTTGATGAGAAAAAGAATGTGATGGTGAGTTGGAATGAGACGGGTGCATGTTATGGGGATGAGTGTAGGCCAAGGTTGGTGGGGTTTATTGGGTGTACAAATGTTAGTGTTCACAATGTGAAGCTCAATCAGCCTGCCTATTGGTGCTTGCACATAGTCGACTGTGATAACACTTCCATTCATGACGTATCAATCTATGGGGACTTCAATTCACCAAACAACGATGGGATTGACATACAAGATTCTAATAATACTGTCATCACAAGGTGCCACATTGACACTGGGGATGATGCTATATGTCCTAAGACATACAATGGTCCTCTCTACAACTTAACGGCTACTGATTGTTGGATCAGAACAAAGTCTTCTGCTATCAAACTTGGAAGCGCTAGCTCCTTTGATTTTGTACATTTGTTGTTTGACAACATTACTATCTTTGAATCTCACAGAGGACTCGGACTTCAAATACGCGATGGAGGAAATGTCGATGACATTACATTCTCGAACATAAACATCAGCACTCGGTACTACCATCCATCATGGTGGGGGAGAGCAGAACCTATCTATGTAACAACCTGTCCGCGACACTCAGATTCAAAAGAAGGGTCGATCTCTAACTTGAGGTTCATCAACATCACATCAGTTTCTGAGAACGGAGTGTTCTTGTCAGGTTCAAAAGGTGGACTTATCAGCAATTTGAAATTCAGCCATGTAAATCTTACATACAGAAGGTGGACAAATTATGTTGGAGGGTTGGTAGATTACAGGCCCGGATGCTCGGGGCTTGTTGAGCATAATATGGCTGGGATCATCATGGAACATGTTGAAAGTTTTGAAGTTGTTAATGTGGACTTGAGATGGTCTCAGGAAAAATCAGTAGGATGGGATAATCCCTTGGATTTCAGACCTTCTACTGTAAACAACATATCTTTTCTTAATTTTCATTCAGGATTGTATAACACCCAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_81521.p1 GENE.R_Transcript_81521~~R_Transcript_81521.p1 ORF type:complete len:476 (+),score=35.38,Glyco_hydro_28|PF00295.13|7e-25,Pectate_lyase_3|PF12708.3|1.5e-16,Pectate_lyase_3|PF12708.3|30,Pectate_lyase_3|PF12708.3|4.2e+02,Beta_helix|PF13229.2|0.00013,Beta_helix|PF13229.2|0.87,Beta_helix|PF13229.2|2.8e+03 R_Transcript_81521:236-1663(+)
MAIFSLPSILQFTTLLSLLQIPPTQSRFATSTGPTLQLPTTTTTTHSVRDFGATGNGRHYDTSPIQSAIDACPSPYPCHVVFPPGKYLTATIRLRSGVVLVIQEGAVILGGTRLKDYPVEAERWYVVVGEQVDNVGIKGGGEINGQGLEFVKRFDEKKNVMVSWNETGACYGDECRPRLVGFIGCTNVSVHNVKLNQPAYWCLHIVDCDNTSIHDVSIYGDFNSPNNDGIDIQDSNNTVITRCHIDTGDDAICPKTYNGPLYNLTATDCWIRTKSSAIKLGSASSFDFVHLLFDNITIFESHRGLGLQIRDGGNVDDITFSNINISTRYYHPSWWGRAEPIYVTTCPRHSDSKEGSISNLRFINITSVSENGVFLSGSKGGLISNLKFSHVNLTYRRWTNYVGGLVDYRPGCSGLVEHNMAGIIMEHVESFEVVNVDLRWSQEKSVGWDNPLDFRPSTVNNISFLNFHSGLYNTQ*

Click here to download the sequence:
Link to NCBI Protein BLAST