Transcript Information: R_Transcript_81584.p1


Annotated TAIR IDAT4G31210.1
Annotated Gene NameDNA topoisomerase, type IA, core
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:15165280-15172534 | Forward length=1284
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.0170183396229
Replicate 21.6658221817889
Replicate 32.6314351453431
Condition 2: 8 Hour
Replicate 12.387877738657
Replicate 21.6447260197236
Replicate 32.8802555695159
Condition 3: 24 Hour
Replicate 13.8136522750153
Replicate 24.1194119911326
Replicate 34.7935882165519


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_81584.p1 GENE.R_Transcript_81584~~R_Transcript_81584.p1 ORF type:complete len:1210 (+),score=262.17,Topoisom_bac|PF01131.16|3.2e-117,Toprim|PF01751.18|2.5e-21,Toprim|PF01751.18|1.6e+03,Toprim_C_rpt|PF13368.2|4.4e-11,Toprim_C_rpt|PF13368.2|0.00019,zf-C4_Topoisom|PF01396.15|1.9e-08,zf-C4_Topoisom|PF01396.15|3.2e+03 R_Transcript_81584:187-3816(+)
ATGATTTTAACAAGACTTCACTGGAATTTAATGGCCACTACTAGTCATCCTGCCTCTTCCCTTTTTGGGTCTGGCAGTTCCTCCCTTATTACTAAGACACAATCCAGCTCATTACGAAGTTATGCAGGCTCTTATTTTCCATGTCTTTCCATGAATTCCTGCCTTGTATGCGCAAAAGGATCTCAAATAAGATTCAAAAAGGTTAGATTAGCTTGTAAGATGATGGCTCAGCAGTCAGAACCGATCAGGTCTGATCTGCATTCCAGTTCTTATAGATTTAGACTCCTTGTTGATGAATCAAGGAATGGCATCAGGATTAGGTCTCTGTCCATATGCGAGTTCACAAGCCCAACCATGCCTTTCTCTACACTAGGTTTTAGGCTTTCGAGTAAGAATGTTAGGTTGACTTATGAAGCTTTTGCTAAGTGGATGTTCTCTACAAAAGCTACACCGAAATCTGATCTTAGTATTACAAGTAATAATAATCCCATGTTTGCTAAAGTTGGAAAAGATGGCCGGAACATGTCAAAGTCCGTTTTCTCCAATAAACACCGGAAGCGAGTCAAAGCATTGGCCACTCAAGGACATAGTGATAATAAGCCTGAAAATACATTTCCCAGTCAGTTGGGTAAGAAGGGTCTTCATAATCATCCAGTATCTGCTCACAAAAATGTCAACGCAGTGAATTCTACTGAAACGCTGGCTGAAGATGGACTGAAGAAAACCAAGTTAAAGAAGTCTGCCAAGTCTCCTTCTTCAAGTAAAGTTGACAGTAAGCTGGAGTCAAATACTGAATCAAAACAGAAGCCACGATCACGAAGCAAGAAGAAAAAGGAAGAGCTTCCTGATTCAGCGTCTTCTTCTGATGCTGTTCAAGCAAAAGGCTCTAAAAAAACTAAAAATCCAAACGGGCAGTCATCAGATACTTTTGAGAAAAGTTCAATTGAAAGTACAACCAAGGAAGAGACTGATCTTTCTCACTCAACCATAGTCGTGCCTAAGAAGAAAGCATCCTCTAAGAAGAAGGGGAAATCATTGAAAGAAGCTAATGTTGAGGAAAACACAAATGGTGCCTTACCTAAACACGAGGAGGATGTGAAGCCAGCAAGTTCTAGCAGCTTGTCTCAAAGACCAAAACCGCCAACTGTTAATGGTATCAAGGCAATTAAATTGAAGCCATTGTACCCTCCTGTGGGGAAATCAGTTGTGGTGGTGGAGTCTGTCACGAAGGCAAAAGTTATACAGGGTTACCTTGGTGACATGTATGAAGTTCTACCAAGTTATGGTCACGTAAGGGATTTAGCTGCTAGGTCAGGCTCTGTCCGACCTGATGATGATTTCAGTATGGTATGGGAGGTTCCATCCCCTGCTTGGACTCATCTTAAGAGTATCAAGGTTGCAATAAGTGGAGCAGATAATCTTATTCTTGCATCAGATCCCGACCGTGAAGGGGAGGCGATTGCTTGGCACATAATTGAAATGTTGCAACAACAGGATGCTTTGCGCAAAGATATAACAGTTGCTAGGGTTGTCTTTCAAGAAATTACCGAGTCTGCCATCAAGAATGCTCTGCAAACTCCAAGAGATATTGATGTTAACTTAGTTCATGCATATCTTGCTCGTCGTGCACTCGATTATTTGATAGGATTTAACATTTCTCCTCTATTATGGAGAAAGCTGCCTGGTTGCCAATCTGCTGGGCGTGTACAATCAGCTGCTCTTTCTCTTATATGTGACAGAGAAATGGAAATTGAGGATTTCAAACCGCAGGAATATTGGACTGTGGAAGCGACATTCAACTCTTCAAATGTATCTTCTGCAGTGGATAATTCTGCTCTTCGATCATACTTGACTCATTTTAATTTCAAAAAGTTAAATCAGCTGTCCGTTGGCTCAGAGACTGAGGCAAAGAACATTGAGCAGCTTGTGAGTTCGTCACATTTCAAGGTAACTGTTGTTAAGAGGACCAAAGTAAATCGAAACCCTCCTACTCCCTATATAACATCAACACTTCAGCAAGATGCTGCAAATAAGTTAAATTTTAGTGCTGCCTACACAATGAAGCTGGCACAGAAGTTGTATGAAGGTATTCAACTTTCAGACGGCACAGCAGCTGGACTGATAACATACATGAGGACCGATGGTTTACACATATCTGATGAAGCTGTAAAGGACATATGTACCTTAGTTACGGAGAGATATGGGTCAGGGTTTGCTGCAAGTAGTCCACGTAAATTCTTTAAAAAGGTGAAGAATGCCCAAGAGGCACATGAAGCCATTAGACCCACAGATATACGAAGACTGCCATCAATGCTTATTGGAGCCCTTGATGCAGATTCCTTAAAGTTGTACACTTTGATTTGGGCACGTACGATGGCATGTCAAATGGAAGCTGCAAAAGTTGAACAGATTCAACTTGATATTGGAAATGAGGAGGGTTCTATTTCCTTTCGAGCTGCATGTTCTGCTGTTGATTTTCCTGGGTTCAGGTCAGTCTATGAAGATCTGGAAACTCGGGCCATCAGAGACACTGAAAATGAAACCACCGACCGTGATGAACTTTATAAGACCCTCAGCAATCTAAAGCATGGAGATCCATTGTGTCTTGGAAATGTGGAACTCAAACAACACCATACTCAGCCTCCACCTCGCTACTCTGAGGCATCATTGGTGAAGAAGTTGGAGGAGCTGGGAATCGGAAGACCTTCGACATACGCAAGCACACTTAAAGTTTTACAAGATAGGAAGTATGTTATAGCAAGAAGCCGAGTTCTATACCCTGAATTCCGTGGCCGTATGGTGTCCGCCTTCCTATCCCACTATTTTACTGAGGTGACAGACTATAGTTTTACTGCTGACATGGAAACTGAACTTGACAATGTTTCTGGCGGCTCGACTGATTGGAAAGGGCTCCTCAAAGATTACTGGAGTAGATTCAGTACTTACTGTGACCGTGCTGGTAAAGTTCACATCCATCAGGTAGAGAAGATGTTAGAAAGAACTTACGGAAATTTTCTCTTCTCGTCTCTTCCTGATGAAAGCCGTGCATGCCCCAGCTGTTTGGAGGGCACTTTAATCTTCAAAGTGAGCAGATTCGGTGCAGGATATTTTATAGGCTGTGATCAGCACCCCAAATGCAAGTTTATAGCTAAGACATTGTATGGTGAGGAGGAAGAAGATGATGCTCCTCAAAACAATGCTCCTGTTGAAGAGCCCAAGATATTGGGCAGTCATCCTGTTTCCGGTGAAAAGGTTCTTCTGAAGAGTGGTCCTTATGGAAGTTATATTCAGCTTGGTGAAGATCGGAAGGGATATTTGCCTAAGCGAGCATCGCTTTCTCAGATCAAAAATGTTAGCTCAGTTACTCTGGAGGACGCCCTAGATTTGCTTCGCTATCCAATCACATTGGGTAATCATCCTGTGGATGGCCAGCCGATAATAATAAAGATTGCAAAAGTGGGTTTTACCATCAGGCATCGACGCAATATTGCTCCTGTACCAAAGAATTTGAATCCAAATGATATTGACATGGAGAAAGCATTGGAGCTTCTCTCAGGTAAAGATGTTCGAAGATGTGGCCGACCAAAAGGCAAACCTAAGCGTGAAGAAGAAGCCATTGATGACTTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_81584.p1 GENE.R_Transcript_81584~~R_Transcript_81584.p1 ORF type:complete len:1210 (+),score=262.17,Topoisom_bac|PF01131.16|3.2e-117,Toprim|PF01751.18|2.5e-21,Toprim|PF01751.18|1.6e+03,Toprim_C_rpt|PF13368.2|4.4e-11,Toprim_C_rpt|PF13368.2|0.00019,zf-C4_Topoisom|PF01396.15|1.9e-08,zf-C4_Topoisom|PF01396.15|3.2e+03 R_Transcript_81584:187-3816(+)
MILTRLHWNLMATTSHPASSLFGSGSSSLITKTQSSSLRSYAGSYFPCLSMNSCLVCAKGSQIRFKKVRLACKMMAQQSEPIRSDLHSSSYRFRLLVDESRNGIRIRSLSICEFTSPTMPFSTLGFRLSSKNVRLTYEAFAKWMFSTKATPKSDLSITSNNNPMFAKVGKDGRNMSKSVFSNKHRKRVKALATQGHSDNKPENTFPSQLGKKGLHNHPVSAHKNVNAVNSTETLAEDGLKKTKLKKSAKSPSSSKVDSKLESNTESKQKPRSRSKKKKEELPDSASSSDAVQAKGSKKTKNPNGQSSDTFEKSSIESTTKEETDLSHSTIVVPKKKASSKKKGKSLKEANVEENTNGALPKHEEDVKPASSSSLSQRPKPPTVNGIKAIKLKPLYPPVGKSVVVVESVTKAKVIQGYLGDMYEVLPSYGHVRDLAARSGSVRPDDDFSMVWEVPSPAWTHLKSIKVAISGADNLILASDPDREGEAIAWHIIEMLQQQDALRKDITVARVVFQEITESAIKNALQTPRDIDVNLVHAYLARRALDYLIGFNISPLLWRKLPGCQSAGRVQSAALSLICDREMEIEDFKPQEYWTVEATFNSSNVSSAVDNSALRSYLTHFNFKKLNQLSVGSETEAKNIEQLVSSSHFKVTVVKRTKVNRNPPTPYITSTLQQDAANKLNFSAAYTMKLAQKLYEGIQLSDGTAAGLITYMRTDGLHISDEAVKDICTLVTERYGSGFAASSPRKFFKKVKNAQEAHEAIRPTDIRRLPSMLIGALDADSLKLYTLIWARTMACQMEAAKVEQIQLDIGNEEGSISFRAACSAVDFPGFRSVYEDLETRAIRDTENETTDRDELYKTLSNLKHGDPLCLGNVELKQHHTQPPPRYSEASLVKKLEELGIGRPSTYASTLKVLQDRKYVIARSRVLYPEFRGRMVSAFLSHYFTEVTDYSFTADMETELDNVSGGSTDWKGLLKDYWSRFSTYCDRAGKVHIHQVEKMLERTYGNFLFSSLPDESRACPSCLEGTLIFKVSRFGAGYFIGCDQHPKCKFIAKTLYGEEEEDDAPQNNAPVEEPKILGSHPVSGEKVLLKSGPYGSYIQLGEDRKGYLPKRASLSQIKNVSSVTLEDALDLLRYPITLGNHPVDGQPIIIKIAKVGFTIRHRRNIAPVPKNLNPNDIDMEKALELLSGKDVRRCGRPKGKPKREEEAIDDF*

Click here to download the sequence:
Link to NCBI Protein BLAST