Transcript Information: R_Transcript_81621.p1


Annotated TAIR IDAT1G12250.1
Annotated Gene NamePentapeptide repeat-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:4159287-4161269 | Forward length=280
E-Value3.9E-128
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.965282465568
Replicate 21.8949729617597
Replicate 32.5635699114828
Condition 2: 8 Hour
Replicate 11.5027426140909
Replicate 21.5337788988539
Replicate 31.5727027252321
Condition 3: 24 Hour
Replicate 12.9008059673994
Replicate 21.751681211526
Replicate 33.397730330457


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_81621.p1 GENE.R_Transcript_81621~~R_Transcript_81621.p1 ORF type:complete len:277 (+),score=64.13,Pentapeptide|PF00805.18|5.1e-05,Pentapeptide|PF00805.18|1.5e-07,Pentapeptide|PF00805.18|8e-08,Pentapeptide|PF00805.18|1.8e-08,Pentapeptide_4|PF13599.2|2.7e-06,Pentapeptide_4|PF13599.2|8.6e-09,Pentapeptide_3|PF13576.2|0.00012,Pentapeptide_3|PF13576.2|7.4e-06,Pentapeptide_3|PF13576.2|0.0043 R_Transcript_81621:161-991(+)
ATGGCAGCAGCTTCGTCACTTTCCATACTACCACTAAAATCAAGCACTATAGCAAGCTTTTCAGCTTACAGGACTCCCAATTCTTCACAGTATTCCTCAAAGCCCAGTAACATTATATGCCAATTGGATTCAAGATCCCAAAACAATGGACCCCTATTATCAGAGTCTAAGGGATTAAAGGCATTGGTATCCACAGCAATGGCAGCAGCTGTAGTTGTGAGCCTCAACAGCTTTAGCTACCCTAACCCTGCTTTGGCTGATTTGAACAAGTATGAAGCCGAAACTCGTGGCGAATTCGGGATTGGCTCTGCTGCTCAATTTGGTTCTGCTGACTTGAAGAAAGCAGTCCATGTGAATGAAAATTTCAGAAGGGCAAATTTCACAGCAGCAGACATGAGAGAATCAGATTTCAGTGGTTCAACCTTCAATGGGGCTTACCTTGAGAAAGCTGTTGCTTACAAAGCCAATTTCACTGGTGCCGATTTGAGCGATACACTGATGGACAGAATGGTCCTAAATGAAGCAAATCTAACCAATGCTGTCCTTGTAAGATCAGTCCTTACTCGGAGTGACCTTGGTGGTGCTATCATTGAAGGTGCTGATTTTAGTGATGCTGTCATTGACCTTCCTCAGAAACAGGCTCTTTGCAAGTATGCAAATGGAACAAACCCCATAACGGGAGTGAGCACCAGAGCAAGCCTCGGTTGTGGAAGCAAGCGAAGAAATGCGTATGGTAGTCCCTCTTCCCCTTTGTTAAGCGCTCCTCCTCAACAGCTCCTCGACAGGGATGGCTTTTGTGACTCAGCTACTGGCCTTTGCGATGCCAAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_81621.p1 GENE.R_Transcript_81621~~R_Transcript_81621.p1 ORF type:complete len:277 (+),score=64.13,Pentapeptide|PF00805.18|5.1e-05,Pentapeptide|PF00805.18|1.5e-07,Pentapeptide|PF00805.18|8e-08,Pentapeptide|PF00805.18|1.8e-08,Pentapeptide_4|PF13599.2|2.7e-06,Pentapeptide_4|PF13599.2|8.6e-09,Pentapeptide_3|PF13576.2|0.00012,Pentapeptide_3|PF13576.2|7.4e-06,Pentapeptide_3|PF13576.2|0.0043 R_Transcript_81621:161-991(+)
MAAASSLSILPLKSSTIASFSAYRTPNSSQYSSKPSNIICQLDSRSQNNGPLLSESKGLKALVSTAMAAAVVVSLNSFSYPNPALADLNKYEAETRGEFGIGSAAQFGSADLKKAVHVNENFRRANFTAADMRESDFSGSTFNGAYLEKAVAYKANFTGADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGAIIEGADFSDAVIDLPQKQALCKYANGTNPITGVSTRASLGCGSKRRNAYGSPSSPLLSAPPQQLLDRDGFCDSATGLCDAK*

Click here to download the sequence:
Link to NCBI Protein BLAST