Transcript Information: R_Transcript_81678.p2


Annotated TAIR IDAT5G61460.1
Annotated Gene NameP-loop containing nucleoside triphosphate hydrolases superfamily protein
Annotated Gene Symbol(s)MIM, ATRAD18, SMC6B
Annotation TypeOrtholog
Chromosome Positionchr5:24714551-24721841 | Reverse length=1057
E-Value1.5E-74
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.655386261938
Replicate 213.017706258105
Replicate 313.896754141666
Condition 2: 8 Hour
Replicate 110.773780576788
Replicate 212.671166376672
Replicate 39.801869735009
Condition 3: 24 Hour
Replicate 110.713643372929
Replicate 213.674260512158
Replicate 312.111196593416


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_81678.p2 GENE.R_Transcript_81678~~R_Transcript_81678.p2 ORF type:complete len:150 (+),score=31.87,SMC_N|PF02463.15|3.2e-10 R_Transcript_81678:3037-3486(+)
ATGTTTTACTACTGTTTCCACTTGCCTCAATTGCTTCTTGAATGGTTTCCACTTAATATTAGCTTTAATGGACATCTGGGGAGGAAAGGGATCAGTGGTAAGATTCTCGTGAACTATGAAGAGAAAACACTCCTGATTGAGGTTAAGATGCCCCAAGATGCATCAAAAGATGCTGTTCAGGATACCAGAGGGCTTTCAGGTGGGGAACGTTCTTTCTCAACGTTGTGCTTTGCATTAGCTCTCCATCAAATGACAGAAGCCCCTTTTCGTGCTATGGATGAATTTGATGTATTTATGGATGCAGTGAGCCGAAAAATTAGCCTTGACACCCTAGTTGACTTTGCACTATCACAAGGATCACAGTGGATATTCATCACCCCTCATGATATCAGCATGGTGAAACAAGATGATAGAGTGAAGAAGCAGCAGATGTCAGCTCCTCGTTCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_81678.p2 GENE.R_Transcript_81678~~R_Transcript_81678.p2 ORF type:complete len:150 (+),score=31.87,SMC_N|PF02463.15|3.2e-10 R_Transcript_81678:3037-3486(+)
MFYYCFHLPQLLLEWFPLNISFNGHLGRKGISGKILVNYEEKTLLIEVKMPQDASKDAVQDTRGLSGGERSFSTLCFALALHQMTEAPFRAMDEFDVFMDAVSRKISLDTLVDFALSQGSQWIFITPHDISMVKQDDRVKKQQMSAPRS*

Click here to download the sequence:
Link to NCBI Protein BLAST