Transcript Information: R_Transcript_81679.p1


Annotated TAIR IDAT5G61460.1
Annotated Gene NameP-loop containing nucleoside triphosphate hydrolases superfamily protein
Annotated Gene Symbol(s)MIM, ATRAD18, SMC6B
Annotation TypeOrtholog
Chromosome Positionchr5:24714551-24721841 | Reverse length=1057
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.5180484455354
Replicate 25.4590381082375
Replicate 37.7882907826918
Condition 2: 8 Hour
Replicate 15.9932069442305
Replicate 24.642544991789
Replicate 38.0039959211802
Condition 3: 24 Hour
Replicate 110.057706023566
Replicate 26.595572658706
Replicate 37.9838008524587


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_81679.p1 GENE.R_Transcript_81679~~R_Transcript_81679.p1 ORF type:complete len:1050 (+),score=259.95,SMC_N|PF02463.15|8.6e-28,AAA_23|PF13476.2|7.3e-20,AAA_23|PF13476.2|1.6e+04,AAA_23|PF13476.2|1.6e+04 R_Transcript_81679:197-3346(+)
ATGGGCGATTTCTGGTCCGGCCCCGTCGCCGGTACAATTCGAAGAATCCGATTGGAGAATTTCATGTGTCATGGCAGTTTGGAGATTGAATTATGTGATCACGTCAATTTCATTACCGGCCAAAATGGAAGTGGTAAAAGTGCTATTTTGACTGCATTATGTATTGCTTTTGGATGTCGAGCTAAGAGTACTAACCGAGCGGCGACATTGAAGGATTTTATCAAGACTGGCGAAAGTTACGCTGCTGTGCAGGTGGAAATTAAAAATGAAGGAGAAGATGCTTATAAGCAAGAAGTGTATGGTGACATCATAATTGTTGAGCGCAGGATAACTGAATCAACAACGTCAACTGTCATAAAGGATCGTCAAGGTAGGAGGGTTTCCAACAAGAAAGAAGAGCTCCGGGAACTTGTAGAACATTTTAATATTGATGTTGAGAATCCATGTGTGATAATGAGTCAAGACAAAAGCAGGGAATTTCTACATTCAGGAAATGCCAAAGACAAATTCAAGTTCTTTTTCAAGGCAACCCTTCTTCAGCAAGTTGATGATCTGTTGTGTACCATCGAAGACCTACTTGAGCATGCCAAGGGTCTGGTTGAGGATCTGGAAAAATCAATTGAGCCCATACTCAGGGAGCTTAATGAGTTGCAAGAGAAGATTAAAAACATGGAACATGTAGAAGAATTGTCGGAGAGGGTAAAAGAGATGAAGTATAAACTTGCTTGGTCATGGGTCTATGATGTTGATCGAGAATTGCTAAAGCAAAGTGAAAGGGTTGAAAAGCTGAAGGCACGGATACCTGCCTGCCAAGCAGAAATAAATCAGAGACTTGAGAGAATTGATGGCTTGAGAAACAGTTACGAAAATAAAAGAAGTCACCATGAGCATATGATGAAGAAAACATCAGAAGTGAAGAAAATGAAGGATGATTTGCAGCAGAATCTTTCGATGGCAACAAAGTATATGCTGGAATTGAAGGAAGAATACAGCCGAAGAATGAATGATGTCCACAGGATGCAAAAGAAAATGAAGTCCCTTGAGCAGCGAGTTCGTGAAATTAAGGAGCAAAATTTGCAGAACACTCAGGCCGAAGAATCTGAGATGCAGGAGAAAATAAAAGCACTTGAAGATGAAGTCAATGCTGCTAATTTGCTGTTGACGAGGCTGAAGGAAGAAGAAACTTCTTTGTCAGAAAGCTTGTCTGCTAGAAGGGATGAAGTAAGAAAGATATCCGATCAGATTGAAGATTGTGTGAAAAAGCAGCGTGATATAAAGTCCTCAATCTATCAACTCCGTCAGCATCAGACGAACAAGGTAACTGCTTTTGGTGGAGAAAAAGTCATCGAGCTTCTGCGCACAATTGAAGCACGTCATCGTCATTTTACTAGACCACCTATTGGTCCAATCGGTGTTCATGTGACTTTGACTCGTGGTGATGCATGGGCATGTGCTGTTGAACATGCTATTGGGAGATTACTGAATTCCTTCATTGTGACTAATGTTAGAGATTCTCACTTGCTGAGATCTTGTGCTCGCGATGTACGTTATAATCATCTTCAGATTATCATATATGATTTCTCGATACCCAGGTACAACATTCCACACGACCGCCTTCCTCAAACAAGACACCCTACTACACTTTCTGTTATACACTCAGACAATGCTACGGTTTTCAATGTATTGGTGGATAAGGGTGGTGCTGAGAGGCAAGTTCTTGTGAAGGACTATGAGGTGGGAAAAACTGTTGCTTTTGAGGAACGGATTTTAAATTTGAAGGAGGTCTACACTGCAGAAGGCCATAAAATGTTTACACGTGGATCAGTTGAGACTGTGCTTCCTCCAATTAAAAGAGCTCGAACTGGGCGCCTTTGTAGCTCATATGATGATGAAATAAAGGAACTTGAAAGAGATGGATCTAACGTGCAAGAGCAGGCTCAAAGAGCTCACCAACAGAAAAGGGTTGCTGAGGAGGAGCTCCATGATCTTCAAGAGAAGTTACGAACAGTAAAGAGGAGATGTCAATCCGTGGAGCGGGATATAGCGTCAAAGAAATTTACTCTTGATGATGTCCAGCGTACATTTGCTGCTGAAGCTGCCACACCTGATGCATCTTCGGTTGATGAGCTTGGTGCCGAAATCTTGAGAATACAAACTGAAATACAAGAAAAAGAAACCTTGCTTGAGGAGCTTCAATCACGAATGGATAAAGCTCAAGTTAAGGTTGATAATCTGAAAGGGTCCTTGAAAAACTTAAGTGAATCAACAAATGAGGACATCAAAGCTCTCAATGAAGCTGAGGATGAGCTTACACAAATCGGACATCAATTAAAACATTTAGATATGGAAAAACAGCATTACGAAAATTTATTAAATGAGAAGATTGTACCAGATATCAGTCAGGCAGAAGCAAAATATCAAGAGCTTGAACAGAAACGCAAGGAAAGTTATGAGAAGGCCTCCTGTATCTGCCCTGAGAATGAAGTTGAAGCCTTGGAAGGCTGTAAAGAGAGTTCCCCAGAGCAACTCAGTGCTCAGCTGGTTCGAATGACTGAAAGACTAAAGCGTGCAAGGGACAAGTGCACAGAGTCCATTGATGACCTTCGAATGGTGTATGAGAAAAAGCAGCGTAAAATTCTTAAGAAACAGAAGACATATGAAAACTTCCGCCAGCAGTTAGAGTTCTCCCAAAGAGCTGTTGACAAGAGAGGAGATAAGTTTAGATATAATGCTACTCTTCTGAAGCGCCAATTGACATGGAACTTTAATGGACATCTGGGGAGGAAAGGGATCAGTGGTAAGATTCTCGTGAACTATGAAGAGAAAACACTCCTGATTGAGGTTAAGATGCCCCAAGATGCATCAAAAGATGCTGTTCAGGATACCAGAGGGCTTTCAGGTGGGGAACGTTCTTTCTCAACGTTGTGCTTTGCATTAGCTCTCCATCAAATGACAGAAGCCCCTTTTCGTGCTATGGATGAATTTGATGTATTTATGGATGCAGTGAGCCGAAAAATTAGCCTTGACACCCTAGTTGACTTTGCACTATCACAAGGATCACAGTGGATATTCATCACCCCTCATGATATCAGCATGGTGAAACAAGATGATAGAGTGAAGAAGCAGCAGATGTCAGCTCCTCGTTCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_81679.p1 GENE.R_Transcript_81679~~R_Transcript_81679.p1 ORF type:complete len:1050 (+),score=259.95,SMC_N|PF02463.15|8.6e-28,AAA_23|PF13476.2|7.3e-20,AAA_23|PF13476.2|1.6e+04,AAA_23|PF13476.2|1.6e+04 R_Transcript_81679:197-3346(+)
MGDFWSGPVAGTIRRIRLENFMCHGSLEIELCDHVNFITGQNGSGKSAILTALCIAFGCRAKSTNRAATLKDFIKTGESYAAVQVEIKNEGEDAYKQEVYGDIIIVERRITESTTSTVIKDRQGRRVSNKKEELRELVEHFNIDVENPCVIMSQDKSREFLHSGNAKDKFKFFFKATLLQQVDDLLCTIEDLLEHAKGLVEDLEKSIEPILRELNELQEKIKNMEHVEELSERVKEMKYKLAWSWVYDVDRELLKQSERVEKLKARIPACQAEINQRLERIDGLRNSYENKRSHHEHMMKKTSEVKKMKDDLQQNLSMATKYMLELKEEYSRRMNDVHRMQKKMKSLEQRVREIKEQNLQNTQAEESEMQEKIKALEDEVNAANLLLTRLKEEETSLSESLSARRDEVRKISDQIEDCVKKQRDIKSSIYQLRQHQTNKVTAFGGEKVIELLRTIEARHRHFTRPPIGPIGVHVTLTRGDAWACAVEHAIGRLLNSFIVTNVRDSHLLRSCARDVRYNHLQIIIYDFSIPRYNIPHDRLPQTRHPTTLSVIHSDNATVFNVLVDKGGAERQVLVKDYEVGKTVAFEERILNLKEVYTAEGHKMFTRGSVETVLPPIKRARTGRLCSSYDDEIKELERDGSNVQEQAQRAHQQKRVAEEELHDLQEKLRTVKRRCQSVERDIASKKFTLDDVQRTFAAEAATPDASSVDELGAEILRIQTEIQEKETLLEELQSRMDKAQVKVDNLKGSLKNLSESTNEDIKALNEAEDELTQIGHQLKHLDMEKQHYENLLNEKIVPDISQAEAKYQELEQKRKESYEKASCICPENEVEALEGCKESSPEQLSAQLVRMTERLKRARDKCTESIDDLRMVYEKKQRKILKKQKTYENFRQQLEFSQRAVDKRGDKFRYNATLLKRQLTWNFNGHLGRKGISGKILVNYEEKTLLIEVKMPQDASKDAVQDTRGLSGGERSFSTLCFALALHQMTEAPFRAMDEFDVFMDAVSRKISLDTLVDFALSQGSQWIFITPHDISMVKQDDRVKKQQMSAPRS*

Click here to download the sequence:
Link to NCBI Protein BLAST