Transcript Information: R_Transcript_8169.p1


Annotated TAIR IDAT5G60580.2
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:24354298-24356706 | Forward length=494
E-Value6E-145
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.4055421894299
Replicate 25.4513721161991
Replicate 35.4827485524259
Condition 2: 8 Hour
Replicate 13.5760289578127
Replicate 24.2635352800638
Replicate 35.2650716403962
Condition 3: 24 Hour
Replicate 15.5881072359523
Replicate 25.3236831804842
Replicate 34.8392693932491


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_8169.p1 GENE.R_Transcript_8169~~R_Transcript_8169.p1 ORF type:complete len:493 (+),score=91.04,RINGv|PF12906.3|1.6e-11 R_Transcript_8169:294-1772(+)
ATGGGGACTGAAGGAGGATCAGTTCGGGAGGAGGAGAATGATAATCAGCAGATAGAGTCAACTGAAATTATTGAAGAAATTTCACCTGGAAATTGGCGAAGACCTCAAAATCTCGTCCTAGAGATACCATCAAGAGGTGCTGAATGCTCTCCAGAAGATGCTGTGACCATAAACATTCTTCCCACACCAAGCCCAACACCCAAACGAGTAAATTTTTCTCCGATTCATGGTCCTAGCACTGCAAGGTTAAACAGGTCTCGAAGCTCTTCCTTTCTCAAGGACAAGTCCTCATTTAAAAGCCTCCTTCCGAAACTTAGTTTCAAATTCAAAAATTCTTCTTCAGAAATTGAGAAGGCAGCGGTTATTGCTCTAGGATCTCCATCATCAGGGAGAGGGGACAGGCCACGATTTGCAAGGACATTTTCCTTAACAAAGGTTTTCACACCAAAGGGAAATAAAGCATCATCTGTGCCTGTTACTCCAATTTCTCACTCTAATCCAGGTTCCGCACATGGAGGCTATAGAGGAAGAGTACAATTTGGCATACATCGTTCGCTTTCTGTTCCAGATCTCTACAAAGATGGGAGCACACATCAGGTAGATTCATTTGGTGGATTGTTTCGTGTAATACCAACAACTCCACGTGCTAGAGAGGGAATACTGAAAGCTTCCGATTCAAGCATAGCAGTGCCTGATGATAAAGACGATGGTGGTGAGGACATCGCGGAAGAAGAAGCTGTTTGTAGAATATGCTATGTTGAACTTGGGGAAGGCTCAGAGACATTGAAGATGGAATGTAGTTGCAAAGGCGATCTTGCTTTAGCTCACCAAGAATGTGCTGTCAAATGGTTTAGCATTAAAGGGAATAAGATTTGTGAAGTCTGTAAAGAAGAGGTTCAAAACCTACCCGTTACACTTCTACGAATTCACAATGGTCAGGCGCAAGGAAGTCGGAGGCAGCCAGCTGATGTAGCTGTATACAGGGTTTGGCATGATGTCCCAGTCCTTGTAATTGTAAGCATGCTTGCATACTTCTGTTTTCTTGAACAGCTTCTGGTCAAGAAAATGGGTTCTGGTGCAGTTGCAATATCGCTTCCATTTTCGTGCATTTTGAGCCTCCTTGCATCAATGACATCGACAACGATGGCATCAAGAAGATACATTTGGATGTATGCTGCTGTTCAATTCATTATGGTGGTTTCCTTTGCCCATATATTGTTCTCCCTGTTACACATGCAAGCAGTTGTATCAGTCTTAGTTGCAACTTTTGCTGGTTTTGGAGTGACAATGTGTGGAACCTCCATTTTTCTTGAGATTTTGAGATGGCGGTGGCGGCGTCAACAAGCTCGCTCAAATATTCAACTTGGCAGTGGCATGGAAGTGTCCAATGCTACTCCGGAATCAGTACATGTCCCCCAAGTACGTCCCACCGAACCTGAAGTTGAGACTGATAATCCCCGTTCCCCCCATGAACCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_8169.p1 GENE.R_Transcript_8169~~R_Transcript_8169.p1 ORF type:complete len:493 (+),score=91.04,RINGv|PF12906.3|1.6e-11 R_Transcript_8169:294-1772(+)
MGTEGGSVREEENDNQQIESTEIIEEISPGNWRRPQNLVLEIPSRGAECSPEDAVTINILPTPSPTPKRVNFSPIHGPSTARLNRSRSSSFLKDKSSFKSLLPKLSFKFKNSSSEIEKAAVIALGSPSSGRGDRPRFARTFSLTKVFTPKGNKASSVPVTPISHSNPGSAHGGYRGRVQFGIHRSLSVPDLYKDGSTHQVDSFGGLFRVIPTTPRAREGILKASDSSIAVPDDKDDGGEDIAEEEAVCRICYVELGEGSETLKMECSCKGDLALAHQECAVKWFSIKGNKICEVCKEEVQNLPVTLLRIHNGQAQGSRRQPADVAVYRVWHDVPVLVIVSMLAYFCFLEQLLVKKMGSGAVAISLPFSCILSLLASMTSTTMASRRYIWMYAAVQFIMVVSFAHILFSLLHMQAVVSVLVATFAGFGVTMCGTSIFLEILRWRWRRQQARSNIQLGSGMEVSNATPESVHVPQVRPTEPEVETDNPRSPHEP*

Click here to download the sequence:
Link to NCBI Protein BLAST