Transcript Information: R_Transcript_81704.p1


Annotated TAIR IDAT4G02820.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:1258581-1260265 | Forward length=532
E-Value7.7E-203
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.6961826427657
Replicate 24.3440621550962
Replicate 34.7788193950594
Condition 2: 8 Hour
Replicate 14.9393899979788
Replicate 26.7468177969094
Replicate 37.1667566070149
Condition 3: 24 Hour
Replicate 16.214440921982
Replicate 26.0081567322607
Replicate 36.3776242966994


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_81704.p1 GENE.R_Transcript_81704~~R_Transcript_81704.p1 ORF type:5prime_partial len:580 (+),score=88.64,PPR_2|PF13041.2|4.6e+03,PPR_2|PF13041.2|6.8e+03,PPR_2|PF13041.2|0.36,PPR_2|PF13041.2|0.012,PPR_2|PF13041.2|7.8e-08,PPR_2|PF13041.2|32,PPR_2|PF13041.2|41,PPR_2|PF13041.2|0.0064,PPR_2|PF13041.2|0.0016,PPR_2|PF13041.2|7.6e+02,PPR_2|PF13041.2|59,PPR|PF01535.16|1.1e+04,PPR|PF01535.16|0.011,PPR|PF01535.16|1.9e+02,PPR|PF01535.16|1,PPR|PF01535.16|4.8,PPR|PF01535.16|17,PPR|PF01535.16|0.00092,PPR|PF01535.16|0.021,PPR|PF01535.16|1.1e+03,PPR|PF01535.16|5.6e+03,PPR|PF01535.16|33,PPR_3|PF13812.2|2.3,PPR_3|PF13812.2|50,PPR_3|PF13812.2|1.2,PPR_3|PF13812.2|1.4e+03,PPR_3|PF13812.2|6.2e+02,PPR_3|PF13812.2|9.5,PPR_3|PF13812.2|0.051,PPR_3|PF13812.2|8e+03,PPR_3|PF13812.2|63,PPR_1|PF12854.3|4.4e+02,PPR_1|PF12854.3|1.7e+02,PPR_1|PF12854.3|8.6,PPR_1|PF12854.3|3.9e+03,PPR_1|PF12854.3|0.13,PPR_1|PF12854.3|5.8,PPR_1|PF12854.3|3.6e+02 R_Transcript_81704:1-1740(+)
ATTTGTTCTAATCCCCAACAATTCCTTCATAAACGACGTCGTTTGTCTGATGATTTTTTTTCCGACTTTTTTGTTCACTTCTACACAAGAAGTACAGTACTCCTCAATGGTCAAACAGAGTCAAAAGAAGGGGAAGTGGGGAGAAACAGAAGCAAAGAAAAGATGTTACAACGCCAAATCCGAGTAGCCGCCATGAGGGCGGTCCGATATTACACAGCCGCTGCTCCGGCGCCTGAGACAGTGGAGGCAATAGAAGCATCTAATTCCTCCGAATCAATCACAGCTACTTCTTCTTCTGGGAAAGGAAAGGGTAAGGGTGGAGATACATTGGGGCGTAGGCTGCTAGCCCTTGTACTACCAAAACGCAGCGCAGTGGTGACAATTAACAAGTGGAAAGAACAAGGCCATGCCGTTCGTAAGTACGAACTCAATCGTATTGTTCGTGAACTTCGCCGTCTCAGGCGTTACAAGCACGCCCTCGAGATTTGTGAATGGATGACTACACAAGAAGATATGAGGTTGTTATCGGGAGATTACGCTATCCATTTGGACTTGATCGCAAAACTTAGGGGCTTACGTAGTGCTGAGAAGTTTTTTGAAGATCTGCCTGATGAAATGAGGAAGCCGCCCACCCTTTCAGCCCTGTTGCACACATATGTTAAGAACCGTCAACATGCTAAGGCGGAGTCTCTAATGTCGAGAATGGTAGAATGTGGTTATGTCGACTGCCCCCTTCCTTATAACCACATGTTGACGATGTACTTGGAGAGTGGGAACTTGCACAAAATTCCTCCTTTGGTCGAAGAGTTGAAGAAGAACACAAAGCCAGATACTGTCTCTTATAATTTATGGTTAACAATGTGTCAACATCAGAATGATGATCAAGCTGCAGAAAAGGTGTTTCTTGAAATGAGGAGGGCAAAGATTGTTCCAGATTGGATGACGTATAGCATATTAACGAGCCTTTATACGAAGAAGGAATTGAATGATAAAGCGGAGGCCACGTTGAAGGAAGTGGAGAAAAGGATATCTCGTCAGAATCGAGTAGCATATTCTTCTCTTATCAGGTTGCAAGCAAATCTGGGCAAGAAAGATGAACTGTACAGGGTATGGAAGAAGATTAAGTCCCTTTTTCACAAAGCAAATGATGTGGAGTACACCAGCATGATATCCTCCCTTCTAAGGGTTGGGGAGCTGGAAGAAGCCGAGAAGCTGTACACTGAGTGGGAATCCGTTTCTACGAGTGGTGACTCCAGGATCCCAAATTTGCTAGTTGCTGCTTATGTCAACAGCGGGCAGATGGACAAAGCAAGGAGGTTTTTCGATGACTTCAGACTGAAAGGCATCAAGCCTAGTTATACCTCATGGGAGCTTCTCACTTGGGGTTACCTGAAAGAGGAGGACATAGATCAAGTCCTTTATTGCTTTGAACAAGCTGTCAAGAGTGTGAAGAGATGGGAACCTGATATGAATATCATCAGCGAGGTTTATAAGCAGTTACAGGAGCAGGGAAACATCCAGGGTGCCGAGAAGATGCTTTTGGTCCTTCGTGAAGCTGGCTATATGTTCACAGAGGTGTACAATATGGTTCTTCGAACCTATGCTAAGGCCGGAAAGATGCCACCTATAGTTTCAGAGCGCATGGAGAAGGATAATGTATTGTTAAATGAAACCACAGAGGAACTGGTCAGCCAAACTAGCAAAATGTGTGTTACTGATGTTTCAAGTTGTTTAACATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_81704.p1 GENE.R_Transcript_81704~~R_Transcript_81704.p1 ORF type:5prime_partial len:580 (+),score=88.64,PPR_2|PF13041.2|4.6e+03,PPR_2|PF13041.2|6.8e+03,PPR_2|PF13041.2|0.36,PPR_2|PF13041.2|0.012,PPR_2|PF13041.2|7.8e-08,PPR_2|PF13041.2|32,PPR_2|PF13041.2|41,PPR_2|PF13041.2|0.0064,PPR_2|PF13041.2|0.0016,PPR_2|PF13041.2|7.6e+02,PPR_2|PF13041.2|59,PPR|PF01535.16|1.1e+04,PPR|PF01535.16|0.011,PPR|PF01535.16|1.9e+02,PPR|PF01535.16|1,PPR|PF01535.16|4.8,PPR|PF01535.16|17,PPR|PF01535.16|0.00092,PPR|PF01535.16|0.021,PPR|PF01535.16|1.1e+03,PPR|PF01535.16|5.6e+03,PPR|PF01535.16|33,PPR_3|PF13812.2|2.3,PPR_3|PF13812.2|50,PPR_3|PF13812.2|1.2,PPR_3|PF13812.2|1.4e+03,PPR_3|PF13812.2|6.2e+02,PPR_3|PF13812.2|9.5,PPR_3|PF13812.2|0.051,PPR_3|PF13812.2|8e+03,PPR_3|PF13812.2|63,PPR_1|PF12854.3|4.4e+02,PPR_1|PF12854.3|1.7e+02,PPR_1|PF12854.3|8.6,PPR_1|PF12854.3|3.9e+03,PPR_1|PF12854.3|0.13,PPR_1|PF12854.3|5.8,PPR_1|PF12854.3|3.6e+02 R_Transcript_81704:1-1740(+)
ICSNPQQFLHKRRRLSDDFFSDFFVHFYTRSTVLLNGQTESKEGEVGRNRSKEKMLQRQIRVAAMRAVRYYTAAAPAPETVEAIEASNSSESITATSSSGKGKGKGGDTLGRRLLALVLPKRSAVVTINKWKEQGHAVRKYELNRIVRELRRLRRYKHALEICEWMTTQEDMRLLSGDYAIHLDLIAKLRGLRSAEKFFEDLPDEMRKPPTLSALLHTYVKNRQHAKAESLMSRMVECGYVDCPLPYNHMLTMYLESGNLHKIPPLVEELKKNTKPDTVSYNLWLTMCQHQNDDQAAEKVFLEMRRAKIVPDWMTYSILTSLYTKKELNDKAEATLKEVEKRISRQNRVAYSSLIRLQANLGKKDELYRVWKKIKSLFHKANDVEYTSMISSLLRVGELEEAEKLYTEWESVSTSGDSRIPNLLVAAYVNSGQMDKARRFFDDFRLKGIKPSYTSWELLTWGYLKEEDIDQVLYCFEQAVKSVKRWEPDMNIISEVYKQLQEQGNIQGAEKMLLVLREAGYMFTEVYNMVLRTYAKAGKMPPIVSERMEKDNVLLNETTEELVSQTSKMCVTDVSSCLT*

Click here to download the sequence:
Link to NCBI Protein BLAST