Transcript Information: R_Transcript_8172.p1


Annotated TAIR IDAT5G60580.2
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:24354298-24356706 | Forward length=494
E-Value2E-91
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.2086916223746
Replicate 22.2050909113007
Replicate 30.88907429026162
Condition 2: 8 Hour
Replicate 11.5094026337343
Replicate 21.9910374242152
Replicate 32.0721016689939
Condition 3: 24 Hour
Replicate 11.4152072948585
Replicate 21.20850733647
Replicate 32.2987087114093


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_8172.p1 GENE.R_Transcript_8172~~R_Transcript_8172.p1 ORF type:complete len:438 (+),score=81.77,RINGv|PF12906.3|1.3e-11 R_Transcript_8172:294-1607(+)
ATGGGGACTGAAGGAGGATCAGTTCGGGAGGAGGAGAATGATAATCAGCAGATAGAGTCAACTGAAATTATTGAAGAAATTTCACCTGGAAATTGGCGAAGACCTCAAAATCTCGTCCTAGAGATACCATCAAGAGGTGCTGAATGCTCTCCAGAAGATGCTGTGACCATAAACATTCTTCCCACACCAAGCCCAACACCCAAACGAGTAAATTTTTCTCCGATTCATGGTCCTAGCACTGCAAGGTTAAACAGGTCTCGAAGCTCTTCCTTTCTCAAGGACAAGTCCTCATTTAAAAGCCTCCTTCCGAAACTTAGTTTCAAATTCAAAAATTCTTCTTCAGAAATTGAGAAGGCAGCGGTTATTGCTCTAGGATCTCCATCATCAGGGAGAGGGGACAGGCCACGATTTGCAAGGACATTTTCCTTAACAAAGGTTTTCACACCAAAGGGAAATAAAGCATCATCTGTGCCTGTTACTCCAATTTCTCACTCTAATCCAGGTTCCGCACATGGAGGCTATAGAGGAAGAGTACAATTTGGCATACATCGTTCGCTTTCTGTTCCAGATCTCTACAAAGATGGGAGCACACATCAGGTAGATTCATTTGGTGGATTGTTTCGTGTAATACCAACAACTCCACGTGCTAGAGAGGGAATACTGAAAGCTTCCGATTCAAGCATAGCAGTGCCTGATGATAAAGACGATGGTGGTGAGGACATCGCGGAAGAAGAAGCTGTTTGTAGAATATGCTATGTTGAACTTGGGGAAGGCTCAGAGACATTGAAGATGGAATGTAGTTGCAAAGGCGATCTTGCTTTAGCTCACCAAGAATGTGCTGTCAAATGGTTTAGCATTAAAGGGAATAAGATTTGTGAAGTCTGTAAAGAAGAGGTTCAAAACCTACCCGTTACACTTCTACGAATTCACAATGGTCAGGCGCAAGGAAGTCGGAGGCAGCCAGCTGATGTAGCTGTATACAGGGTTTGGCATGATGTCCCAGTCCTTGTAATTGTAAGCATGCTTGCATACTTCTGTTTTCTTGAACAGCTTCTGGTCAAGAAAATGGGTTCTGGTGCAGTTGCAATATCGCTTCCATTTTCGTGCATTTTGAGCCTCCTTGCATCAATGACATCGACAACAATGGCATCAAGTAAGATTCATTTGGATGTATGCTGCTGCTCAATTCATTATGGTGGTTTCCTTTGCCCATATATTGTTCTCCCTGTTACACATGCAAGCAGTTGTATCAGTCTTAGTTGCAACTTTTGCTGGTTTTGGAGTGACAATGTGTGGAACCTCCATTTTTCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_8172.p1 GENE.R_Transcript_8172~~R_Transcript_8172.p1 ORF type:complete len:438 (+),score=81.77,RINGv|PF12906.3|1.3e-11 R_Transcript_8172:294-1607(+)
MGTEGGSVREEENDNQQIESTEIIEEISPGNWRRPQNLVLEIPSRGAECSPEDAVTINILPTPSPTPKRVNFSPIHGPSTARLNRSRSSSFLKDKSSFKSLLPKLSFKFKNSSSEIEKAAVIALGSPSSGRGDRPRFARTFSLTKVFTPKGNKASSVPVTPISHSNPGSAHGGYRGRVQFGIHRSLSVPDLYKDGSTHQVDSFGGLFRVIPTTPRAREGILKASDSSIAVPDDKDDGGEDIAEEEAVCRICYVELGEGSETLKMECSCKGDLALAHQECAVKWFSIKGNKICEVCKEEVQNLPVTLLRIHNGQAQGSRRQPADVAVYRVWHDVPVLVIVSMLAYFCFLEQLLVKKMGSGAVAISLPFSCILSLLASMTSTTMASSKIHLDVCCCSIHYGGFLCPYIVLPVTHASSCISLSCNFCWFWSDNVWNLHFS*

Click here to download the sequence:
Link to NCBI Protein BLAST