Transcript Information: R_Transcript_81780.p1


Annotated TAIR IDAT2G30695.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein folding, protein transport; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Trigger factor, ribosome-binding, bacterial (InterPro:IPR008881); Has 253 Blast hits to 253 proteins in 72 species: Archae - 0; Bacteria - 138; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:13079269-13081095 | Reverse length=199
E-Value2E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.4017053887788
Replicate 20.92089036913588
Replicate 31.5070222102732
Condition 2: 8 Hour
Replicate 11.0739414450546
Replicate 21.1768885179571
Replicate 32.4679821457544
Condition 3: 24 Hour
Replicate 12.617995561054
Replicate 22.4183397906335
Replicate 32.3999676191773


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_81780.p1 GENE.R_Transcript_81780~~R_Transcript_81780.p1 ORF type:complete len:228 (+),score=35.39,Trigger_N|PF05697.9|2.4e-09 R_Transcript_81780:170-853(+)
ATGGCAACTATGTCTATGGCGCCTGTAATCTCCTCAGAATCAACTCCTCTTCCATTCACCAGCTCCAATTTCAAATTCGCCATTTGGAATGCCATCCCAGGAAGTCACAGTGTACCGTTTTGTAATATCCAAGAAAGTTTCCCCAAGAGACTATCATATGCTAATCAACCTGGTGAAAGAGGTCAGAGAAATATATTGAAGCCAATCTCTGCAGTTCGTTCAGGTATGATGCCAAATCCCGAGATCGGTGCGCTAGGATTGGAAACGGCTGAGGTAGTTGTTGAATCACGAGATGAAGACAAGTTGAAATTGAGAGTAGACGTGGCCGGGAAAGACACACAAAAGGCCGTCAATTTGATCTTAAAAGCCTTAAGTGGCTCAGTCCCACCAACGCCTGGGTTCCGTCGCCAAAAAGGAGGAAAGTTCGCCAAGGTTGACATAAAGGTGTTTAAGAACTTATTTGGTGAAGATAGCCTGAACAAATTTATTATAACGGAAATAGTTACTTCAACTGTGGCTAATTATCTGGAGAAGGAGAATCTTGCTGTGAAGGACAACAAGATCAAGACAACCCAGACTGATGCAGAATTAGCAGCCAATTTCGTTCCTGGAACCGTATTTGGGTTCAATGTTGAATTGGAACTTGTAAAAGAAGAAGCTGAGACGACCAGCGATGACTCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_81780.p1 GENE.R_Transcript_81780~~R_Transcript_81780.p1 ORF type:complete len:228 (+),score=35.39,Trigger_N|PF05697.9|2.4e-09 R_Transcript_81780:170-853(+)
MATMSMAPVISSESTPLPFTSSNFKFAIWNAIPGSHSVPFCNIQESFPKRLSYANQPGERGQRNILKPISAVRSGMMPNPEIGALGLETAEVVVESRDEDKLKLRVDVAGKDTQKAVNLILKALSGSVPPTPGFRRQKGGKFAKVDIKVFKNLFGEDSLNKFIITEIVTSTVANYLEKENLAVKDNKIKTTQTDAELAANFVPGTVFGFNVELELVKEEAETTSDDS*

Click here to download the sequence:
Link to NCBI Protein BLAST