Transcript Information: R_Transcript_81804.p1


Annotated TAIR IDAT5G58140.2
Annotated Gene Namephototropin 2
Annotated Gene Symbol(s)PHOT2, NPL1
Annotation TypeOrtholog
Chromosome Positionchr5:23524771-23529993 | Forward length=915
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.6774249275751
Replicate 22.9896156123973
Replicate 34.5913833297874
Condition 2: 8 Hour
Replicate 12.520998143528
Replicate 22.3022156550618
Replicate 32.6839730928283
Condition 3: 24 Hour
Replicate 14.0232739939021
Replicate 22.9229861180283
Replicate 33.4761414891567


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_81804.p1 GENE.R_Transcript_81804~~R_Transcript_81804.p1 ORF type:complete len:913 (+),score=177.53,Pkinase|PF00069.21|3.2e-61,PAS_9|PF13426.2|3.5e-18,PAS_9|PF13426.2|2.9e-19,Pkinase_Tyr|PF07714.13|8e-22,PAS_3|PF08447.7|1.7e-08,PAS_3|PF08447.7|3.8e-07,PAS_3|PF08447.7|1.1e+04,PAS|PF00989.20|1.1e-07,PAS|PF00989.20|2.3e-05,PAS_4|PF08448.6|0.0042,PAS_4|PF08448.6|9.5e+03,PAS_4|PF08448.6|0.0097 R_Transcript_81804:258-2996(+)
ATGGAAGGTGGAAATAGTAGTAGTAGTGGTGTTAGCAATGGTTCATCATCAGGAGCCAAGAAATGGATGGCATTTGAACCAAATAGTAGCATGGTCTCTAGTAACAACATTGAAGCAAGCATGGCTAAGAGGGCAGCAGAATGGGGGCTAACAGTAAGATCAGGAGGAGATATTGTTGCCACTAGTGTGACGGTCCGGTCGTCCGGCGAGAAGGACCGGAGCAAGAACTCATCGGAGAGATTCTCATTGGACTCAATGAGGACATCAGAAGAATCAAATTCTGGATTGTCAGAAAATTTGCCAAGAGTTTCTCAAGAACTAAAAGATGCCCTGGCAACTTTGCAACAAACTTTTGTTGTTTCTGATGCTACAAAACCTGATATTCCTATCATGTATGCTAGTAGTGGCTTCTTTACCATGACTGGCTACTCTTCCAAGGAGATTATTGGGCGTAACTGCCGTTTTTTGCAGGGACCAGAAACGGATCAGAAGGAGGTGAACAAAATAAGAGAAGCAGTGAGAAATGGAAATAGCTACTGTGGCAGACTCTTGAACTACAAGAAGGACGGTACCCCTTTCTGGAACCTTCTTACCATCACTCCTATCAAAGATGACCAGGGCCGTACCATCAAGTTCATTGGCATGCAGGTTGAGGTCAGTAAATATACCGAAGGCATAGTTGACAAGGCACTGCGTCCTAATGGCTTACCTCAGTCATTAATCCGTTATGATGCTCGTCAGAAGGAGAAGGCTTTGGGCTCCATTATAGAGGTAGTTCAGACTGTAAAGGATCCACGATCACACATTCAATCTGCGAGTAACAATGAAGCTAACAAGCAGGAGGCTCAGGGGAAGTTTGACCTCGATTATATGCTGCCGCAATCTGCTGAAATTGACAGTGTGGCAGATTCTGATAGACAGACTCCTCAGTCTGACAAAAAAGGTGATGCTTCTCTTAGAGATGTGGAGAAGAGCTCCAGAAAATCTGCACGGATTTCGTTAATGGGGCTTACAGGGAGGTCTTCTGCAAAACATGAACGTGAGCCAAGTTTGGAGCCAGAAGCTCTGCTGACAAGTACTATAGAACGTGTTGACAGCTGGGAACGTGCAGAAAGAGAAAGGGACATACGTCAAGGAATTGACCTAGCTACTACACTGGAGCGGATTGAAAAAAATTTTGTGATAAGTGATCCCAGGCTTCCAGATAATCCAATTATATTTGCATCTGACAGCTTTCTTGAATTAACAGAGTATACACGGGAAGAAATTTTGGGAAGAAACTGTCGATTCCTCCAGGGACCAGAAACAGATCAGGCCACTGTCCAAAAAATAAGAGATGCTATTAAGGAACAGCGAGAAATTACCGTCCAGTTGATTAATTATACTAAAAGTGGGAAGAAGTTCTGGAACTTGTTTCATTTGCAGCCCATGAAAGACCAAAAGGGGGAGTTGCAATACTTTATTGGTGTGCAGCTAGATGGAAGTGATCATATTGAACCATTACGTAATCGCTTGTCAGAAAACACCGAGCAACAAAGTGCGAAACTGGTCAAAGCTACTGCAGATAATGTTAATGAAGCCGTGAAAGAACTCCCCGATGCCAACTTGCGGCCAGAAGACCTCTGGGCTATTCATTCCCAACTTGTATATCCAAAGCCCCATAAGAGGGACTCCTCATCTTGGAAAGCAATACAAAAGATTACCGCCAAAGGTGAAAATATTGGCTTAGATCATTTCAAACCCATAAAACCCCTGGGTTGCGGTGATACTGGCAGCGTGCATTTGGTGGAGCTGAAAGGCACAGGAGAATTGTTTGCTATGAAGGCAATGGACAAATCTGTGATGTTGAACCGTAACAAGGTTCACCGAGCTTGCATCGAAAGGGAAATCATCTCCTTTTTGGATCATCCTTTTCTTCCTACTCTATATGCTTCCTTCCAGACATCTACACACGTTTGTTTGATAACGGACTTTTGCCCTGGAGGAGAGTTGTTTGCTTTGCTTGACAGGCAGCCTATGAAGATCTTGATAGAGGAATCGGCAAGGTTCTATGCGGCTGAGGTTGTAATTGGGCTGGAATATCTTCATTGTTTAGGTATCATATACCGTGACTTGAAGCCTGAAAATATACTACTGCAGAAGGATGGTCATCTTGTTTTGACTGACTTTGACCTCTCCTTTTTGACATCATGCGAACCACGAATAATAAAGCATTCTCAGCCAAAGAAAAGACGATCAAAGAGTCAACCACCGCCAACATTTTTTGCAGAACCAGCTAGCCAATCAAATTCATTTGTTGGAACTGAAGAATACATTGCTCCTGAAATTATTACTGGAGCAGGCCATACTAGCGCTATCGATTGGTGGGCCCTAGGCATTTTGCTGTACGAGATGCTCTATGGACGTACTCCTTTTCGAGGAAAGAATAGACAGAAGACATTTGCGAACATATTGCACAAAGACCTTACCTTTCCAAGCAGCATTCAGGTAAGCCTTGGAGCAAGACAATTGATCCATGCACTATTAAACAGAGATCCTGCAAGCAGGTTGGGATCCCAAGGTGGAGCTGATGAGATAAAACAACACCCATTTTTCCGTGGAATAAACTGGCCTCTAATCCGCTGCATGAAACCTCCACAATTGGATGTACCTATTCAGTTGATTGAAAAAGATTTGCATGCGAAAGATATTAATTGGGATGATGATGGAGTCCTTGATACTCCAATGGATCTCTTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_81804.p1 GENE.R_Transcript_81804~~R_Transcript_81804.p1 ORF type:complete len:913 (+),score=177.53,Pkinase|PF00069.21|3.2e-61,PAS_9|PF13426.2|3.5e-18,PAS_9|PF13426.2|2.9e-19,Pkinase_Tyr|PF07714.13|8e-22,PAS_3|PF08447.7|1.7e-08,PAS_3|PF08447.7|3.8e-07,PAS_3|PF08447.7|1.1e+04,PAS|PF00989.20|1.1e-07,PAS|PF00989.20|2.3e-05,PAS_4|PF08448.6|0.0042,PAS_4|PF08448.6|9.5e+03,PAS_4|PF08448.6|0.0097 R_Transcript_81804:258-2996(+)
MEGGNSSSSGVSNGSSSGAKKWMAFEPNSSMVSSNNIEASMAKRAAEWGLTVRSGGDIVATSVTVRSSGEKDRSKNSSERFSLDSMRTSEESNSGLSENLPRVSQELKDALATLQQTFVVSDATKPDIPIMYASSGFFTMTGYSSKEIIGRNCRFLQGPETDQKEVNKIREAVRNGNSYCGRLLNYKKDGTPFWNLLTITPIKDDQGRTIKFIGMQVEVSKYTEGIVDKALRPNGLPQSLIRYDARQKEKALGSIIEVVQTVKDPRSHIQSASNNEANKQEAQGKFDLDYMLPQSAEIDSVADSDRQTPQSDKKGDASLRDVEKSSRKSARISLMGLTGRSSAKHEREPSLEPEALLTSTIERVDSWERAERERDIRQGIDLATTLERIEKNFVISDPRLPDNPIIFASDSFLELTEYTREEILGRNCRFLQGPETDQATVQKIRDAIKEQREITVQLINYTKSGKKFWNLFHLQPMKDQKGELQYFIGVQLDGSDHIEPLRNRLSENTEQQSAKLVKATADNVNEAVKELPDANLRPEDLWAIHSQLVYPKPHKRDSSSWKAIQKITAKGENIGLDHFKPIKPLGCGDTGSVHLVELKGTGELFAMKAMDKSVMLNRNKVHRACIEREIISFLDHPFLPTLYASFQTSTHVCLITDFCPGGELFALLDRQPMKILIEESARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHLVLTDFDLSFLTSCEPRIIKHSQPKKRRSKSQPPPTFFAEPASQSNSFVGTEEYIAPEIITGAGHTSAIDWWALGILLYEMLYGRTPFRGKNRQKTFANILHKDLTFPSSIQVSLGARQLIHALLNRDPASRLGSQGGADEIKQHPFFRGINWPLIRCMKPPQLDVPIQLIEKDLHAKDINWDDDGVLDTPMDLF*

Click here to download the sequence:
Link to NCBI Protein BLAST