Transcript Information: R_Transcript_81821.p1


Annotated TAIR IDAT3G17350.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G50290.1); Has 203 Blast hits to 203 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 203; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:5934111-5935276 | Forward length=301
E-Value2.1E-62
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.0557325666822
Replicate 25.8594326743157
Replicate 37.458007589445
Condition 2: 8 Hour
Replicate 17.0705307696503
Replicate 26.2835811375425
Replicate 35.9098267136144
Condition 3: 24 Hour
Replicate 19.0763423923481
Replicate 26.4114124681911
Replicate 310.774180214093


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_81821.p1 GENE.R_Transcript_81821~~R_Transcript_81821.p1 ORF type:5prime_partial len:516 (+),score=73.10,GUB_WAK_bind|PF13947.2|2.6e-16,WAK_assoc|PF14380.2|5.3e-06 R_Transcript_81821:3-1550(+)
TTGGGTTTGTCCTTTGCTATTCTGGCCATCTACTTGGATTCCATACTACCTCAAACAATCAACCTCAAAATGAAGCTCCTCCCCAAAACAACTCCACTTATTTACTTCATCCTCCTCCTCCTAACCCCTCCCCTACCCAGCCGGGCCGATGGCCCGTGCCGGGACCAATGTGGGACCATTCCGGTCCACTTCCCCTTCGGCATCGACGACGGTTGCGGGGCCCCACAATTCCGTCACATGTTCACATGCAACGCCACCTCAAACTCCTTATTCTTCATCACCACAAATGGCAACTACAAGGTCCAGTCTATAGATTACAAGGCTCAAACTATGACTGTCTACGACCCTGACATGTCCACCTGCACTATCCTTCAACCTCACCACGACGTCGTTCTTTCAGACATCCAGTACGCCATCATCCCCCCTTCTCCTGACACCGTCTTCGCCCTCCTCAACTGCTCCCTCGATTCTCCCATCCTCCATCGTTATCGCAACCTCTGCTTTGACCTCCCGGGTCACAAGTGCGAGGATCTCTACTCCTCGTGCAGCTCCTTCCGAGCTTTTACCACTCCAGGTGGTGGTAATAATAACTACAGCCCGTCGGGCGGTAGTTATTATGGTAACCCAGGTGCTAGCGCACCTAATAATTTGCCACCACCTGGTTATTATGGTGGTAGTGGTACTATTAGGGATACTATTCCCAATGTCCCACCTGGTTATTATGGTGCCAACAATCCACCTCCGGATCATTCTGGTGGTGGTGGTGGTGATAGTGGTGGTGGTGATATTACGCTAGGTGGTGAGGTCCCACCTGACTTTAACAATCCACCTCCTGGTTATGGTGGTAATGGTGGTGATATTACGCCAGGTGGTGGGGTCCCACCTGGCTTTAACAATCCACCTCCTGGTTATTATGGTGGTGGTAGTGGTAGGGATACTATGCCAGGTGGTGGTGTCCCACCTGGTTTTAACGATCCACCACCTGGTTATTACGGTGGTAGTAATATTCCACCTCCAGGGTATTATGGCGGAATTAATACTCCGCCTCCTGGTTATTTTGGCGCTGCTAATGATACAAGCAGCGCGCCAGGTGGACCTGATAATTTGCCAGGAAACAATAACGGCATTAATAATAATAATAATGGTCAAAGTGCAGCATATCCACCGTGCTGTTTCACTGGATACAGCACGGTGAGGGCGATGAGGATGAATATATTGGATTGTACGCATTTTACAAGCTTCTATAATGTGGATCAGGTGAAAGGGGTATCGCCGATGGACTGGTCGTACGGGTTGAAGTTTAGCTACAGTGTGCCGGATATGGGGTGTGAGAGATGTGTTAAGTCTGGTGGGAATTGTGGGTTTGATGCTGAAACTGAAGCCTTGCTATGCCTTTGCTCTACTGCTAATAACTCCACCAGACAATGTGGCAGTGATACAGGGGCCAGTGAAGGCCGGACACCATCAACAAAACTTCAAGCTTTTATCATTGGCCTAGGATTTCTCTCCCTTCTTCCTCATTTATGCATAGTATCAACTTTTCTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_81821.p1 GENE.R_Transcript_81821~~R_Transcript_81821.p1 ORF type:5prime_partial len:516 (+),score=73.10,GUB_WAK_bind|PF13947.2|2.6e-16,WAK_assoc|PF14380.2|5.3e-06 R_Transcript_81821:3-1550(+)
LGLSFAILAIYLDSILPQTINLKMKLLPKTTPLIYFILLLLTPPLPSRADGPCRDQCGTIPVHFPFGIDDGCGAPQFRHMFTCNATSNSLFFITTNGNYKVQSIDYKAQTMTVYDPDMSTCTILQPHHDVVLSDIQYAIIPPSPDTVFALLNCSLDSPILHRYRNLCFDLPGHKCEDLYSSCSSFRAFTTPGGGNNNYSPSGGSYYGNPGASAPNNLPPPGYYGGSGTIRDTIPNVPPGYYGANNPPPDHSGGGGGDSGGGDITLGGEVPPDFNNPPPGYGGNGGDITPGGGVPPGFNNPPPGYYGGGSGRDTMPGGGVPPGFNDPPPGYYGGSNIPPPGYYGGINTPPPGYFGAANDTSSAPGGPDNLPGNNNGINNNNNGQSAAYPPCCFTGYSTVRAMRMNILDCTHFTSFYNVDQVKGVSPMDWSYGLKFSYSVPDMGCERCVKSGGNCGFDAETEALLCLCSTANNSTRQCGSDTGASEGRTPSTKLQAFIIGLGFLSLLPHLCIVSTFL*

Click here to download the sequence:
Link to NCBI Protein BLAST