Transcript Information: R_Transcript_81902.p1


Annotated TAIR IDAT1G27590.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3453 (InterPro:IPR021850); BEST Arabidopsis thaliana protein match is: phosphatidylinositol 3- and 4-kinase family protein (TAIR:AT1G27570.1); Has 109 Blast hits to 109 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 65; Fungi - 4; Plants - 38; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:9592293-9593912 | Forward length=264
E-Value4E-36
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.179458024444
Replicate 21.8802657089222
Replicate 31.1966206206945
Condition 2: 8 Hour
Replicate 11.827303354272
Replicate 24.3386785662002
Replicate 36.6375292567087
Condition 3: 24 Hour
Replicate 14.2831729902433
Replicate 22.4688722638706
Replicate 35.2269145520949


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_81902.p1 GENE.R_Transcript_81902~~R_Transcript_81902.p1 ORF type:5prime_partial len:134 (-),score=18.35,DUF3453|PF11935.4|2.9e-24 R_Transcript_81902:55-456(-)
ACGAAATTTTTATGTGCTATAGTTGAGGAGATGGCTTGGCAGTTTCATCACCATGGTAAGGTTGATAGATGGGCTGAGGAAATCTGGATTCAGATGATTGAGTTCAAGGATGTTGTTTGTTCTCTTGTTTTTGAGCCGGTTTCCATGGGGACAAGGTTATTGGCATTTAAGTTCTTGGAAACTTGTATATTAATGTTTACGCCAGATACAAGCAAATCTGATAGACCAACCTTTGGAGGCAATGAACGCAGGTTCAATGTTTCGTGGCTCACTAGTGGCCACCCAACTCTAGATCGAACTAAAATCAAATCAGAAGCTAATAGGTTATTAACCAATCTATTAGATATGTTGCAATCATCGAGCAGTCTTCCTGGTCCAGTGACAATTGCCATTGTCAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_81902.p1 GENE.R_Transcript_81902~~R_Transcript_81902.p1 ORF type:5prime_partial len:134 (-),score=18.35,DUF3453|PF11935.4|2.9e-24 R_Transcript_81902:55-456(-)
TKFLCAIVEEMAWQFHHHGKVDRWAEEIWIQMIEFKDVVCSLVFEPVSMGTRLLAFKFLETCILMFTPDTSKSDRPTFGGNERRFNVSWLTSGHPTLDRTKIKSEANRLLTNLLDMLQSSSSLPGPVTIAIVN*

Click here to download the sequence:
Link to NCBI Protein BLAST