Transcript Information: R_Transcript_81942.p1


Annotated TAIR IDAT5G66420.2
Annotated Gene NameLOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP033271 (InterPro:IPR008322), TIM-barrel signal transduction protein, predicted (InterPro:IPR009215); Has 1232 Blast hits to 1230 proteins in 311 species: Archae - 18; Bacteria - 959; Metazoa - 1; Fungi - 84; Plants - 42; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:26521893-26524986 | Reverse length=754
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 138.563616446773
Replicate 261.123182246385
Replicate 352.952843010734
Condition 2: 8 Hour
Replicate 173.42512021979
Replicate 240.718157517172
Replicate 334.473615926252
Condition 3: 24 Hour
Replicate 132.70117369039
Replicate 246.041084209242
Replicate 332.744470672175


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_81942.p1 GENE.R_Transcript_81942~~R_Transcript_81942.p1 ORF type:complete len:754 (+),score=159.43,UPF0261|PF06792.7|2.7e-155,PEP_hydrolase|PF09370.6|8.6e-125 R_Transcript_81942:245-2506(+)
ATGGGGAAAGACAAGGTTCGAGTATTTTGTGTTGGTACTGCTGATACCAAGCTCTCGGAGCTCCGTTTCTTAGCCCAATGTGTTCGTTCCTCTTTCAATTCTTTCTCCCCAAACAACAATTCTCAATCCAAGGTGCAGGTTACTATTGTTGATGTGTCCACCAGTCAGAAGGCAATCCACAATCTGGAGGACTTTGATTTTGTCCCAAGGAAGGATGTTTTATCATGCTATCTTGGCCCTGGAAACCAGGATTATTTGCTTCCTGATGATAGAGGCCGAGCAGTTGCTATAATGAGTAAAGCTCTTGAACATTTCCTAAAGAAAGCTTATGATGCTCACACGGTTGCAGGAGCTATTGGTCTAGGAGGCAGTGGAGGAACCTCTTTACTGGCATCTGCTTTCAGAAGCCTTCCAGTTGGGGTGCCTAAAGTTGTTGTGTCTACTGTGGCCAGTGGCCAAACTCAGCCTTACATTGGTACATCAGATTTGGTTTTGATGCCATCTGTGGTTGATATTTGTGGTATCAACAGCGTGAGCAGGGTTATTCTATCGAATGCTGGAGCAGCTTTTTCAGGAATGATGCTTGGAAGCCTTGAGCAATCCCTAAATTCAACTGATGCCAAGGACAAACCCACTGTTGGAATTACAATGTTTGGTGTCACTACCCCATGTGTAGATGCTGTTAAGAACAGGCTGCTTGAGGAAGGTTATGAATCTTTGGTTTTCCATGCCACTGGGGTAGGAGGCAAAGCAATGGAGGATCTTGTAAATGGCGGGTTTATACAGGGTGTGTTGGATATTACAACCACAGAAGTTGCTGATCATATAGTTGGAGGTGTCATGGCCTGTGACAGCTCCCGCTTTGATGCTATCATAGAGAAGAAGATCCCCTTTGTCTTAAGTGTTGGGGCATTGGATATGGTTAATTTTGGACCAATAGACAGCATACCTGCCAAATTTCAGGATCGAAAGATTCATGTACACATTGAGCAGGTGTCACTCATGCGGACCACAATCGATGAGAACAAGAAGTTTGCCGAGTTCATAGCTCACAAACTGAACAAGGAATCGTCAAAATTTAGGGTCTGCTTGCCAGATAAGGGGGTGTCTGCTTTGGATGCACAAGGAAAGCCTTTCTATGATCCTGAAGCTACTGGCAGCCTATTAAGTGAACTTCAAAGATTGATTCAAAAGAATGAAGACCAGAAGGTCGAAGTATATCCTTATCATATCAATGATCCTGAATTCGCAAAAGTATTAGTTGATTCATTTCTAGAGATTAGCGGGAAGAATGGAGCAGATTCAAGCAAGACAAAACTTTCTACCTATGAGCGCAATAGAGAGCTTCATGAATCAAGACCCGAAGCAAATGAATCTAGTTATTCATCCTTACAGTACTACTTGAGTGAAATGCCTGATGCAAAAAAAGAAACTTTACAAAGAATGCAGTCTATTCTGCAGAAACTCAATGCCCAGATTAACGAAGGGATTCCAATCATAGGGGCTGGAGCTGGGACAGGTATTTCGGCCAAGTTTGAGGAAGCCGGTGGCGTTGATTTGATAGTAATATACAACTCCGGAAGGTTTCGGATGGCTGGAAGGGGTTCCTTGGCTGGCCTATTGCCTTTTGCTGATGCAAATGCTGTAGTAGTTGAAATGGCCAATGAAGTATTGCCAGTTGTCAAACATGTACCTGTTCTTGCTGGAGTATGTGGCACTGATCCATTCCGCAAAATGGACTATTTTCTGAAGCAGTTGGAAGCAATTGGATTTTCTGGTGTGCAGAATTTTCCAACTGTTGGCCTCTTTGATGGTAATTTTAGGAAGAATCTCGAAGAAACAGGAATGGGATATGGATTAGAGATTGAGATGATTCATAAAGCCTTTAAGATGGGATTCTTAACAACACCATATGCTTTCAACGAAGATGAAGCCGTAGGAATGGCAAAAGCTGGTGCTCACATTATAGTAGCACACATGGGACTTACAACTTCTGGGTCAATCGGTGCAACAACCTCCGTTTCACTGGAAGAGAGTGTAGATCTCGGTGGTCGCCGTATCATTAAAAAACATAGGATCAGACCAGATGTTATTGTGCTCTGCCATGGAGGCCCCATCTCCGGACCTGAGGAGGCCGAATTCATTCTGAAGAAAACCAAGGGAGTTCATGGCTTTTATGGCGCATCAAGCATGGAGAGGCTGCCTGTCGAGCAGGCCATAACCAGTACTGTCCAACAATATAAACTAATTTCCCTTAACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_81942.p1 GENE.R_Transcript_81942~~R_Transcript_81942.p1 ORF type:complete len:754 (+),score=159.43,UPF0261|PF06792.7|2.7e-155,PEP_hydrolase|PF09370.6|8.6e-125 R_Transcript_81942:245-2506(+)
MGKDKVRVFCVGTADTKLSELRFLAQCVRSSFNSFSPNNNSQSKVQVTIVDVSTSQKAIHNLEDFDFVPRKDVLSCYLGPGNQDYLLPDDRGRAVAIMSKALEHFLKKAYDAHTVAGAIGLGGSGGTSLLASAFRSLPVGVPKVVVSTVASGQTQPYIGTSDLVLMPSVVDICGINSVSRVILSNAGAAFSGMMLGSLEQSLNSTDAKDKPTVGITMFGVTTPCVDAVKNRLLEEGYESLVFHATGVGGKAMEDLVNGGFIQGVLDITTTEVADHIVGGVMACDSSRFDAIIEKKIPFVLSVGALDMVNFGPIDSIPAKFQDRKIHVHIEQVSLMRTTIDENKKFAEFIAHKLNKESSKFRVCLPDKGVSALDAQGKPFYDPEATGSLLSELQRLIQKNEDQKVEVYPYHINDPEFAKVLVDSFLEISGKNGADSSKTKLSTYERNRELHESRPEANESSYSSLQYYLSEMPDAKKETLQRMQSILQKLNAQINEGIPIIGAGAGTGISAKFEEAGGVDLIVIYNSGRFRMAGRGSLAGLLPFADANAVVVEMANEVLPVVKHVPVLAGVCGTDPFRKMDYFLKQLEAIGFSGVQNFPTVGLFDGNFRKNLEETGMGYGLEIEMIHKAFKMGFLTTPYAFNEDEAVGMAKAGAHIIVAHMGLTTSGSIGATTSVSLEESVDLGGRRIIKKHRIRPDVIVLCHGGPISGPEEAEFILKKTKGVHGFYGASSMERLPVEQAITSTVQQYKLISLN*

Click here to download the sequence:
Link to NCBI Protein BLAST