Transcript Information: R_Transcript_81947.p1


Annotated TAIR IDAT5G66420.2
Annotated Gene NameLOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP033271 (InterPro:IPR008322), TIM-barrel signal transduction protein, predicted (InterPro:IPR009215); Has 1232 Blast hits to 1230 proteins in 311 species: Archae - 18; Bacteria - 959; Metazoa - 1; Fungi - 84; Plants - 42; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:26521893-26524986 | Reverse length=754
E-Value1.4E-65
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.27448061586043
Replicate 21.2629353633864
Replicate 31.033386658473
Condition 2: 8 Hour
Replicate 11.1046254863419
Replicate 20.84063465568367
Replicate 30.95534792738879
Condition 3: 24 Hour
Replicate 10.6904603677505
Replicate 21.8241191563635
Replicate 31.9748304980659


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_81947.p1 GENE.R_Transcript_81947~~R_Transcript_81947.p1 ORF type:3prime_partial len:133 (+),score=34.48,PEP_hydrolase|PF09370.6|2.3e-49 R_Transcript_81947:126-521(+)
ATGCTGATTTCTGCATTGGTTGGAACTACTGCTGACTGGGATAGCATGCCTTATGTTTTGGCAGAAACTTTACAAAGAATGCAGTCTATTCTGCAGAAACTCAATGCCCAGATTAACGAAGGGATTCCAATCATAGGGGCTGGTGCTGGGACAGGGATTTCGGCCAAGTTTGAGGAAGCAGGTGGCATTGATTTGATAGTAATATACAACTCCGGAAGGTTTCGGATGGCTGGAAGGGGTTCCTTGGCTGGCCTATTGCCTTTTGCTGATGCAAATGCTGTAGTAGTTGAAATGGCCAATGAAGTATTGCCAGTTGTCAAACATGTACCTGTTCTTGCTGGAGTATGTGGCACTGATCCATTCCGCAAAATGGACTATTTTCTGAAGCAGTTGGAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_81947.p1 GENE.R_Transcript_81947~~R_Transcript_81947.p1 ORF type:3prime_partial len:133 (+),score=34.48,PEP_hydrolase|PF09370.6|2.3e-49 R_Transcript_81947:126-521(+)
MLISALVGTTADWDSMPYVLAETLQRMQSILQKLNAQINEGIPIIGAGAGTGISAKFEEAGGIDLIVIYNSGRFRMAGRGSLAGLLPFADANAVVVEMANEVLPVVKHVPVLAGVCGTDPFRKMDYFLKQLE

Click here to download the sequence:
Link to NCBI Protein BLAST