Transcript Information: R_Transcript_82040.p1


Annotated TAIR IDAT4G21770.1
Annotated Gene NamePseudouridine synthase family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:11564028-11566345 | Reverse length=472
E-Value8E-64
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.24542933138735
Condition 2: 8 Hour
Replicate 10.96194469435606
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.15753756350412
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_82040.p1 GENE.R_Transcript_82040~~R_Transcript_82040.p1 ORF type:complete len:280 (+),score=41.92,PseudoU_synth_2|PF00849.18|9.9e-10 R_Transcript_82040:208-1047(+)
ATGCCCGGGAACCCGTTTGCAATTGCGCCATCAGAAATCGGATCAATATTCTCAAATGGGTTCTTACTCTCATCATCATACCATCATCAAAGGTGCAATCTTTACCAGAGTTTTGGGGCTAAAGTGACCATCCAACGCACTTTCACTGGGAAGCATAGGTGGGTTTGCTCCTACAATGAGGATATTGGTTCTCCAACTGCTGTTGATGGCTACCGGAAATATGATCGCCTACTCCCATGTCCTCCAATTACTCACCCACCGAGAGTTGAACACTTGGTTGTTTTAGAGGAAGGCCCTGTCTGTGATTATATCAGCACAGCTCTGAATCTACCACTGCAGTATGTTGCTGATCTTATCCGTTTCGGGGCTGTGCATTACGCACTTGTACATCCAGAACCTCCAGCCACTGCGACTCCTGAGCAAAGAGGGCTATATGAAAAATTTACATCGTCTCATTTGCTGAAACAAAGACAATCACTTAAAGGAAAAACTATCCGAGAAGCACAAAAAACTTTCAGGGTAGGAGGAACTTCCAACAATGTTGAAGAAACCTGTGTAAATTTTGTGACACGTACTTTGGGGTTGACTAGTCCACTCATGACTACACATCAGATCGATAACTGCACTGAAGGATGTGTTGTGCTTGCCAGAAGCGAGGAATTCTGCTCTGTTTTTCATCGAAAGATCAGAGACAAAGAGGTGAATAAACTCTATCTTGCACTTGCTGCATCTTCAGTATCACATGGAGCAATCATCCATTATATGTCTCCAGCTAGTCGTGCTCCAAGAGTAATTTCAGAAGGTAATCTTGCCTATCCATCAGCTCTGCTAATTGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_82040.p1 GENE.R_Transcript_82040~~R_Transcript_82040.p1 ORF type:complete len:280 (+),score=41.92,PseudoU_synth_2|PF00849.18|9.9e-10 R_Transcript_82040:208-1047(+)
MPGNPFAIAPSEIGSIFSNGFLLSSSYHHQRCNLYQSFGAKVTIQRTFTGKHRWVCSYNEDIGSPTAVDGYRKYDRLLPCPPITHPPRVEHLVVLEEGPVCDYISTALNLPLQYVADLIRFGAVHYALVHPEPPATATPEQRGLYEKFTSSHLLKQRQSLKGKTIREAQKTFRVGGTSNNVEETCVNFVTRTLGLTSPLMTTHQIDNCTEGCVVLARSEEFCSVFHRKIRDKEVNKLYLALAASSVSHGAIIHYMSPASRAPRVISEGNLAYPSALLIV*

Click here to download the sequence:
Link to NCBI Protein BLAST