Transcript Information: R_Transcript_82042.p2


Annotated TAIR IDAT4G21770.1
Annotated Gene NamePseudouridine synthase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:11564028-11566345 | Reverse length=472
E-Value1.2E-70
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5714469696116
Replicate 20.2780966942556
Replicate 31.061901742868
Condition 2: 8 Hour
Replicate 10
Replicate 20.44425593061958
Replicate 30.3606280255706
Condition 3: 24 Hour
Replicate 10.60815383384647
Replicate 20
Replicate 31.5944685533501


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_82042.p2 GENE.R_Transcript_82042~~R_Transcript_82042.p2 ORF type:5prime_partial len:151 (+),score=20.47,PseudoU_synth_2|PF00849.18|1.6e-14 R_Transcript_82042:1-453(+)
GAAGTTGGAACATACTTGCGTGTATATGTACACCCTAGACGCTTCCCGAGGTGCTACCAGATTGACTGGAAATCAAGAGTTCTATCGGTCACTGAATCATATGTGGTTCTGGATAAGCCTGCTGGCACCTCTGTAGGAGGAACTTCCAACAATATTGAAGAAACCTGTGTAAATTTTGTGACACGTACTTTGGGGTTGACTAGTCCACTCATGACTACACATCAGATCGATAACTGCACTGAAGGATGTGTTGTGCTTGCCAGAAGCGAGGAATTCTGCTCTGTTTTTCATCGAAAGATCAGAGACAAAGAGGTGAATAAACTCTATCTTGCACTTGCTGCATCTTCAGTATCACATGGAGCAATCATCCATTATATGTCTCCAGCTAGTCGTGCTCCAAGAGTAATTTCAGAAGGTAATCTTGCCTATCCATCAGCTCTGCTAATTGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_82042.p2 GENE.R_Transcript_82042~~R_Transcript_82042.p2 ORF type:5prime_partial len:151 (+),score=20.47,PseudoU_synth_2|PF00849.18|1.6e-14 R_Transcript_82042:1-453(+)
EVGTYLRVYVHPRRFPRCYQIDWKSRVLSVTESYVVLDKPAGTSVGGTSNNIEETCVNFVTRTLGLTSPLMTTHQIDNCTEGCVVLARSEEFCSVFHRKIRDKEVNKLYLALAASSVSHGAIIHYMSPASRAPRVISEGNLAYPSALLIV*

Click here to download the sequence:
Link to NCBI Protein BLAST