Transcript Information: R_Transcript_82044.p1


Annotated TAIR IDAT4G21770.1
Annotated Gene NamePseudouridine synthase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:11564028-11566345 | Reverse length=472
E-Value3.6E-151
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.8882373401433
Replicate 20.9412134669375
Replicate 31.4217975059681
Condition 2: 8 Hour
Replicate 10.84434017059466
Replicate 21.5421297821507
Replicate 31.0640599329192
Condition 3: 24 Hour
Replicate 11.7416267552051
Replicate 21.5210523372812
Replicate 30.98117296872298


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_82044.p1 GENE.R_Transcript_82044~~R_Transcript_82044.p1 ORF type:5prime_partial len:290 (+),score=46.24,PseudoU_synth_2|PF00849.18|1.5e-20 R_Transcript_82044:1-870(+)
GAAGTTGGAACATACTTGCGTGTATATGTACACCCTAGACGCTTCCCGAGGTGCTACCAGATTGACTGGAAATCAAGAGTTTTATCGGTCACTGAATCCTATGTAGTTCTGGACAAGCCTGCTGGCACCTCTGTAGGAGGAACTTCCAACAATATTGAAGAAACCTGTGTAAATTTTGTGACACGTACTTTGGGGTTGACTAGTCCACTCATGACTACACATCAGATCGATAACTGCACTGAAGGATGTGTTGTGCTTGCCAGAAGCGAGGAATTCTGCTCTGTTTTTCATCGAAAGATCAGAGACAAAGAGGTCAAGAAACTCTGTCTTGCACTTGCTACATCTCCAGTATCACGTGGAGCAATCATCCATTATATGTCTCCGGCTAGTCGTGCTCCGCGAGTAATTTCAGAAGAATACATGGAAGGATGGCAGTTGTGCCAGCTTGAAGTTCTGGATTGCAAGGAAGTTCCCTGGCCAAACTCTGCCATTGAGGAGAGGTATCAAATCCAGGATTGCGAGTGGCCTGTAAAGAAATATGCTTATGAATATAGAATCAATCTTGTGACTGGCCGAACACATCAGATTCGAGCACAATTCGCAGCCTGTGGGGCACCTATTGTTGGTGATTCAATGTACATGCCTGCTGCGTTGGCAGAATTAACCAACCCTGGCATTAATCCCTTTGGTAAACTCAAAAGAGAATATTCATGTGAGGATGAAAGACAAGTTGCCATTAAGAATTGGATTTCGTTGCATGGAAAGGAGCCTACCATTGCCATTGGTCTCCAAGCATGTCAAATTTCTTGGGATGACGATGAACATATTCATGAAGCTGGATCGCCTTGGTGGAGATGGGACCATATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_82044.p1 GENE.R_Transcript_82044~~R_Transcript_82044.p1 ORF type:5prime_partial len:290 (+),score=46.24,PseudoU_synth_2|PF00849.18|1.5e-20 R_Transcript_82044:1-870(+)
EVGTYLRVYVHPRRFPRCYQIDWKSRVLSVTESYVVLDKPAGTSVGGTSNNIEETCVNFVTRTLGLTSPLMTTHQIDNCTEGCVVLARSEEFCSVFHRKIRDKEVKKLCLALATSPVSRGAIIHYMSPASRAPRVISEEYMEGWQLCQLEVLDCKEVPWPNSAIEERYQIQDCEWPVKKYAYEYRINLVTGRTHQIRAQFAACGAPIVGDSMYMPAALAELTNPGINPFGKLKREYSCEDERQVAIKNWISLHGKEPTIAIGLQACQISWDDDEHIHEAGSPWWRWDHI*

Click here to download the sequence:
Link to NCBI Protein BLAST