Transcript Information: R_Transcript_82047.p1


Annotated TAIR IDAT4G21770.1
Annotated Gene NamePseudouridine synthase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:11564028-11566345 | Reverse length=472
E-Value3.4E-219
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.6001895374199
Replicate 21.8635769600265
Replicate 32.8915802882717
Condition 2: 8 Hour
Replicate 13.3323958212227
Replicate 23.0873012404004
Replicate 34.4752491667621
Condition 3: 24 Hour
Replicate 14.7545754613588
Replicate 23.3496152555709
Replicate 32.9356290309843


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_82047.p1 GENE.R_Transcript_82047~~R_Transcript_82047.p1 ORF type:complete len:507 (+),score=94.17,PseudoU_synth_2|PF00849.18|1.3e-22 R_Transcript_82047:61-1521(+)
ATGGCAACTGGAGCGGCTAACTTCAGTTCAATGATCTTCACCAACACCTTAATCTCATCACTACGGAGAACCCATCTCCGGTTAACCGGAGCTCCGGTTTCTCTCCGGCGCACAGTAGCCACCACCACCACCACCAATGTTCCCAAGAACAACAAGAAGCTTAAGAGACAGAAATGGGGTTGTTCTGCTTCAACCTTAAAGACCGAACCCATTGTTTCTGACCCTAAACTTCCTGATGCTCTCAAAGTTCCTGATCCCACTTCGAATGGTTATCCTGAATATGATCGCCTGTTACCCTGCCCCTCAGCTAATTTCCCGCCTAGGGTTGAACACTTGGTAGTCTTGGAGCAAAGTCCTGTTTCGGATTACATTAGCAAAGCTTTGGATATCCCACCTCTGTATGCTGCTGATCTCATCCGTTTTGGAGCTGTGTATTATGCCCTTGTATGTCCAGACCCCCCAGTAACGGCTACTCCTGAGCAAATCAGACTGTATAAGCAATTTACTTCACCTGAAAATCTGAAGCAACGGCAATCAATCAAGGGGAAAACTGTTCGAGAAGCACAAAAAACTTTCAGAGTAACTCGTGTTGATGAACTTTTTGAAGTTGGAACATACTTGCGTGTACATGTGCACCCAAAACGCTTCCCAAGGTGCTATGAAATTGATTGGAAGTCAAGAATCTTAGCAGTGACTGAATCATATGTGGTCCTGGACAAACCTGCTGGTACCTCTGTTGGAGGAACTTCTGACAACATTGAAGAAAGCTGTGCAAATTTTGCCACTCGTGCCTTAGAATTGACTTCTCCACTCCTTACTACACATCAGATTGATAATTGCACTGAAGGATGTGTTGTGCTGGCTAGAACGAAGGAGTACTGCTCTGTTTTTCACAAAAAGATCAGAGATAAAAAGGTTAATAAGTTGTACCTTGCACTTGCTGCTGCTCCAGTTCCATGTGGAATAATTACCCATTTCATGCGCCCAGCTAATCTTGCTCCACGACTAATTTCAGAAGAATATATTGAAAGATGGCTCTTGTGCCAACTTGAGGTCTTGGATTGCAAGGAGGTTCCTTGGCCAAACACTTCCACTCAAGAGAGATATCGGATCGAAGACTGTGGATGGCCTATAAAGAATACTGCTTATGAGTGTACAGTTAATCTTTTGACTGGCCGAACTCACCAGATTCGAGCTCAGTTTGCTGCATGTGGAGCACCTATAGTTGGCGATTCAATGTACATGCCAGCTTCTCTTGCAGAAATAGCCGATCCTGGAGTTAATCCATTAGGCATCAATAAAAGAGATTATCTGAGCGAGGATGACAAAAGAATTGCTGTAGAGAATTGGATTGCGCTACATGGGAAGGAGCCTCCTGTTGCTATTGGTCTTCAAGCCTGCCAAATCTCATGGGATAAGGATGAACATATTTACAATGCCCGATCACCTTGGTGGAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_82047.p1 GENE.R_Transcript_82047~~R_Transcript_82047.p1 ORF type:complete len:507 (+),score=94.17,PseudoU_synth_2|PF00849.18|1.3e-22 R_Transcript_82047:61-1521(+)
MATGAANFSSMIFTNTLISSLRRTHLRLTGAPVSLRRTVATTTTTNVPKNNKKLKRQKWGCSASTLKTEPIVSDPKLPDALKVPDPTSNGYPEYDRLLPCPSANFPPRVEHLVVLEQSPVSDYISKALDIPPLYAADLIRFGAVYYALVCPDPPVTATPEQIRLYKQFTSPENLKQRQSIKGKTVREAQKTFRVTRVDELFEVGTYLRVHVHPKRFPRCYEIDWKSRILAVTESYVVLDKPAGTSVGGTSDNIEESCANFATRALELTSPLLTTHQIDNCTEGCVVLARTKEYCSVFHKKIRDKKVNKLYLALAAAPVPCGIITHFMRPANLAPRLISEEYIERWLLCQLEVLDCKEVPWPNTSTQERYRIEDCGWPIKNTAYECTVNLLTGRTHQIRAQFAACGAPIVGDSMYMPASLAEIADPGVNPLGINKRDYLSEDDKRIAVENWIALHGKEPPVAIGLQACQISWDKDEHIYNARSPWWR*

Click here to download the sequence:
Link to NCBI Protein BLAST