Transcript Information: R_Transcript_82067.p1


Annotated TAIR IDAT3G49240.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)emb1796
Annotation TypeHomolog
Chromosome Positionchr3:18256086-18257975 | Forward length=629
E-Value2E-38
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.6461393996036
Replicate 28.5642804329637
Replicate 38.4393243775298
Condition 2: 8 Hour
Replicate 15.1549189362621
Replicate 27.7478494098845
Replicate 310.349602546712
Condition 3: 24 Hour
Replicate 112.586517120452
Replicate 210.543961487162
Replicate 311.327847162517


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_82067.p1 GENE.R_Transcript_82067~~R_Transcript_82067.p1 ORF type:5prime_partial len:228 (-),score=82.84,PPR_2|PF13041.2|0.0039,PPR_2|PF13041.2|9.4e-08,PPR_2|PF13041.2|3.9e-08,PPR_2|PF13041.2|0.011,PPR|PF01535.16|0.00029,PPR|PF01535.16|3.5e-05,PPR|PF01535.16|0.061,PPR_1|PF12854.3|0.00016,PPR_1|PF12854.3|0.00054,PPR_1|PF12854.3|0.83,PPR_3|PF13812.2|9e-05,PPR_3|PF13812.2|8.7,PPR_3|PF13812.2|0.13 R_Transcript_82067:146-829(-)
GGGAGAATGGGTGAGAAGGGGGTTAATCCGGATGAAGTTACTTATGTTTTGTTGATGGATGCTTGCTTTAAGGATAATAGGCCGGATGATGCTGCCGGGTATTTCAGGAAGATGATTGATGCAAGTTTGAGGCCCAATTTGGCTGTTTATAATAATTTGGTTGAAGGGTTAGTTAGTTTAGGGAAGATTGATGAGGCAAAGTCATTCTTTGACTTGATGGTGAAGAAGCTCAAGTTCAACTCGGCTAGTTATGAATTTATGTTCAAGGCCTTGTGTGATGTTGGGAAGGTGGATGATGTGCTTCAGATTGTCAGTGATATGTTGGATGAGGGAAGTGTTGACCTTAATGAAGATATGCACCGAATTGTCAAGGATGGGCTGAGAAGTCAAGGCCGAGAGGAGGAGGAATTGGACAGACTTATTGAGCAGAAAGAGAAAGAGAAAGAAGAAGCTAAGAGAAGGGAGGCTGAAGAAGCTGAGAGAGCCAAAGCCAGTGCAAGAGCTGCCGTTGCATCTTTGATTCCGTCTAAGTTGTTTGGGAACAAGGAAGATGGCAAGGAATCTACGGCTTTACCTGGAATTACCAATACAGTATCCTCTAATGAAGCTTCGGCCAGTGGAGAAGCCAGCACAGCAGCAGAATCAGATCTCAAGAGTGTTGATACTCCACATATGACAGCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_82067.p1 GENE.R_Transcript_82067~~R_Transcript_82067.p1 ORF type:5prime_partial len:228 (-),score=82.84,PPR_2|PF13041.2|0.0039,PPR_2|PF13041.2|9.4e-08,PPR_2|PF13041.2|3.9e-08,PPR_2|PF13041.2|0.011,PPR|PF01535.16|0.00029,PPR|PF01535.16|3.5e-05,PPR|PF01535.16|0.061,PPR_1|PF12854.3|0.00016,PPR_1|PF12854.3|0.00054,PPR_1|PF12854.3|0.83,PPR_3|PF13812.2|9e-05,PPR_3|PF13812.2|8.7,PPR_3|PF13812.2|0.13 R_Transcript_82067:146-829(-)
GRMGEKGVNPDEVTYVLLMDACFKDNRPDDAAGYFRKMIDASLRPNLAVYNNLVEGLVSLGKIDEAKSFFDLMVKKLKFNSASYEFMFKALCDVGKVDDVLQIVSDMLDEGSVDLNEDMHRIVKDGLRSQGREEEELDRLIEQKEKEKEEAKRREAEEAERAKASARAAVASLIPSKLFGNKEDGKESTALPGITNTVSSNEASASGEASTAAESDLKSVDTPHMTA*

Click here to download the sequence:
Link to NCBI Protein BLAST