Transcript Information: R_Transcript_82117.p1


Annotated TAIR IDAT4G21190.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)emb1417
Annotation TypeHomolog
Chromosome Positionchr4:11292493-11293763 | Reverse length=307
E-Value5E-94
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.27489399028191
Replicate 20.37945121234274
Replicate 30.13799239515754
Condition 2: 8 Hour
Replicate 10.14750521052557
Replicate 20.40411232243106
Replicate 30.16402057789506
Condition 3: 24 Hour
Replicate 10.48405015239135
Replicate 20.13286300536492
Replicate 30.13185364269215


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_82117.p1 GENE.R_Transcript_82117~~R_Transcript_82117.p1 ORF type:complete len:332 (+),score=69.57 R_Transcript_82117:164-1159(+)
ATGAGTTTAGGTTTAAACTTGAAAATGTCGTTGAAACTTGAACCCGCCAGCAAGGGATATAGTGGGAAACTTCCAAGTTTCAAGCTTTTCAACAATGGCTGCTCTTTCAATATGCTCAGCTTGAGGTACCCTTCCCAAATTATAACCCCTAGCTTGGATTCCACCACCAGCACCTCAAGAAATTTTATTGTATGTGGGTTAAAAGGTCCAAGACCAAGATATCCTAGAGTATGGAAAACCAGAAAAAGAATTGGGACAATCTCCAAGTCTCAAAAGCTAGTTGATTGTATAAAGGAATTATCAAATGTTAAAGAAGAAGTATATGGTGCTCTTGATGCATTTATTGCTTGGGAATTAGAATTCCCCCTTATTACAGTGAAGAAAGCTTTGAAGACCTTAGAGCATGAAAAGGAATGGAAGAGAATAATTCAGGTGACAAAATGGATGCTAAGCAAAGGTCAAGGGAGGACAATGGGAAGCTATTACACGTTGCTGAATGCATTAGCAGAAGAGGATAGGCTAGAAGAGGTTGAAGAGCTTTGGACGAAGTTATTTTCAGAGAATCTGGAAAGCATGCCTCGCTCTTTCTTTGACAAGATGATTAGCGTTTACCATGCCAGAGGGATGCATGACAAGATGTTTAATACATTTGCTGACATGGAAGAGCTTGGTATTCGGCCGACTACTTCAATTGTTTCAAAGATTGGAGATGTCTTCCAAAAACTCGGGATGATGGACAAATATGAAAAGTTGAATAAAAAATATCCTCCACCTAAGTGGGAATTTCGGTACATCAAGGGCAAACGTGTTAAAGTCCGTGCAAAGCAGCTTAATGAATCCTCTGATGAAGGTGAAGATATACCCACGAAGCAGCTGAATGAATCCTCTGATGAAGGTGAAGATATACCCACGAAGCAACCGAATGAATCCTCTGGTGAAGGTGAAGATACACATGAGTCTAGTGGGGAAGAGGGGAGTCCGCTGACAGTATTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_82117.p1 GENE.R_Transcript_82117~~R_Transcript_82117.p1 ORF type:complete len:332 (+),score=69.57 R_Transcript_82117:164-1159(+)
MSLGLNLKMSLKLEPASKGYSGKLPSFKLFNNGCSFNMLSLRYPSQIITPSLDSTTSTSRNFIVCGLKGPRPRYPRVWKTRKRIGTISKSQKLVDCIKELSNVKEEVYGALDAFIAWELEFPLITVKKALKTLEHEKEWKRIIQVTKWMLSKGQGRTMGSYYTLLNALAEEDRLEEVEELWTKLFSENLESMPRSFFDKMISVYHARGMHDKMFNTFADMEELGIRPTTSIVSKIGDVFQKLGMMDKYEKLNKKYPPPKWEFRYIKGKRVKVRAKQLNESSDEGEDIPTKQLNESSDEGEDIPTKQPNESSGEGEDTHESSGEEGSPLTVL*

Click here to download the sequence:
Link to NCBI Protein BLAST