Transcript Information: R_Transcript_82118.p1


Annotated TAIR IDAT4G21190.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)emb1417
Annotation TypeOrtholog
Chromosome Positionchr4:11292493-11293763 | Reverse length=307
E-Value1.4E-124
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.862813949725
Replicate 25.0391120999115
Replicate 37.0482269526623
Condition 2: 8 Hour
Replicate 17.9861590289477
Replicate 27.5682984693243
Replicate 39.8297952898096
Condition 3: 24 Hour
Replicate 17.5584165334287
Replicate 25.836160814122
Replicate 36.5326380142432


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_82118.p1 GENE.R_Transcript_82118~~R_Transcript_82118.p1 ORF type:5prime_partial len:325 (+),score=71.00 R_Transcript_82118:2-976(+)
ACGTTAAATCTCTTGTGTCTATTTTGTTCTCTTGGTTGTGATTGTTCTATTCTCGCTCTCCGATTCCGCTTCCGCACAACAGATTCCACCACCAGCACCTCAAGAAATTTTATTGTATGTGGGTTAAAAGGTCCAAGACCAAGATATCCTAGAGTATGGAAAACCAGAAAAAGAATTGGGACAATCTCCAAGTCTCAAAAGCTAGTTGATTGTATAAAGGAATTATCAAATGTTAAAGAAGAAGTATATGGTGCTCTTGATGCATTTATTGCTTGGGAATTAGAATTCCCCCTTATTACAGTGAAGAAAGCTTTGAAGACCTTAGAGCATGAAAAGGAATGGAAGAGAATAATTCAGGTGACAAAATGGATGCTAAGCAAAGGTCAAGGGAGGACAATGGGAAGCTATTACACGTTGCTGAATGCATTAGCAGAAGAGGATAGGCTAGAAGAGGTTGAAGAGCTTTGGACGAAGTTATTTTCAGAGAATCTGGAAAGCATGCCTCGCTCTTTCTTTGACAAGATGATTAGCGTTTACCATGCCAGAGGGATGCATGACAAGATGTTTAATACATTTGCTGACATGGAAGAGCTTGGTATTCGGCCGACTACTTCAATTGTTTCAAAGATTGGAGATGTCTTCCAAAAACTCGGGATGATGGACAAATATGAAAAGTTGAATAAAAAATATCCTCCACCTAAGTGGGAATTTCGGTACATCAAGGGCAAACGTGTTAAAGTCCGTGCAAAGCAGCTTAATGAATCCTCTGATGAAGGTGAAGATATACCCACGAAGCAGCTGAATGAATCCTCTGATGAAGGTGAAGATACACACGTGTCTAGTGGGGAAAGAGGGGAGTCTATTGACAGTATTGTAGCTGTGAATGCTTCTGCTGAAGAATATGATCAGCAATTGACAGGGCAGCAGGAAAACAGCTGGAGACCTATTGTGCTTGAAAATGAGCAGGGAACTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_82118.p1 GENE.R_Transcript_82118~~R_Transcript_82118.p1 ORF type:5prime_partial len:325 (+),score=71.00 R_Transcript_82118:2-976(+)
TLNLLCLFCSLGCDCSILALRFRFRTTDSTTSTSRNFIVCGLKGPRPRYPRVWKTRKRIGTISKSQKLVDCIKELSNVKEEVYGALDAFIAWELEFPLITVKKALKTLEHEKEWKRIIQVTKWMLSKGQGRTMGSYYTLLNALAEEDRLEEVEELWTKLFSENLESMPRSFFDKMISVYHARGMHDKMFNTFADMEELGIRPTTSIVSKIGDVFQKLGMMDKYEKLNKKYPPPKWEFRYIKGKRVKVRAKQLNESSDEGEDIPTKQLNESSDEGEDTHVSSGERGESIDSIVAVNASAEEYDQQLTGQQENSWRPIVLENEQGT*

Click here to download the sequence:
Link to NCBI Protein BLAST