Transcript Information: R_Transcript_82123.p1


Annotated TAIR IDAT2G37680.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Vacuolar import/degradation protein Vid24 (InterPro:IPR018618); Has 318 Blast hits to 317 proteins in 131 species: Archae - 0; Bacteria - 0; Metazoa - 80; Fungi - 184; Plants - 51; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:15803500-15805515 | Reverse length=215
E-Value4.6E-136
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.639908591278
Replicate 210.546978813768
Replicate 313.211327729874
Condition 2: 8 Hour
Replicate 110.819335674364
Replicate 213.936549612646
Replicate 316.125384318576
Condition 3: 24 Hour
Replicate 117.939123787229
Replicate 211.59183374249
Replicate 315.779508030089


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_82123.p1 GENE.R_Transcript_82123~~R_Transcript_82123.p1 ORF type:complete len:215 (+),score=35.34,Vac_ImportDeg|PF09783.5|4.3e-49 R_Transcript_82123:499-1143(+)
ATGCCAGTGAGAGTTTCTGAAACCTCTGTGCCTTCCCACATTTCAGGTGGTTGTTCTGGGCAGACTTCTCCTCCAGCTTGTACCCTACTGAGCGTTGCGCAGGCTTATTCTGGAACTCAAAATGTTTCTAGTGTACAAAAGGATGAGGCATGGAGAGTAAATGTCCGGATACAAGGTTGTGACCTTGAGCATGGATATTTATGTGGCACAATGGAAGCTCTCAATGTTCCAATGGCAGATACACCTGTGGTAACTTTCTGGGAAGGAGAAATTGTTGATACAAAGAACTATACCTTCTTCACTGGAAAGTGGGAAGCAACGCCTGAAGATGATATTAGACACTGGACAAAATTCCCATCTTTTTCACCCCTTCATAGTCAAGTGGAGACAGATGGGGGCAAGTCACTAGATTTGAGTAATTATCCATACATATTTATGAGATGGAAAGAACAGTACTTCGTAAATGTTGGTACAGACTGTGGGTTAACTATAGCGGGGTTTTATTATGTTTGCTTCTCCTGTAGTGATGGCTCCATCAATGGCTTCTATTATGATCCTAATAGCAGCCCTTTTCAGAAGCTCGAGCTCAAATCTACCAATGAAGGTCGATCTGGCTTCAGCTTTTCATCATACGAGTTACAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_82123.p1 GENE.R_Transcript_82123~~R_Transcript_82123.p1 ORF type:complete len:215 (+),score=35.34,Vac_ImportDeg|PF09783.5|4.3e-49 R_Transcript_82123:499-1143(+)
MPVRVSETSVPSHISGGCSGQTSPPACTLLSVAQAYSGTQNVSSVQKDEAWRVNVRIQGCDLEHGYLCGTMEALNVPMADTPVVTFWEGEIVDTKNYTFFTGKWEATPEDDIRHWTKFPSFSPLHSQVETDGGKSLDLSNYPYIFMRWKEQYFVNVGTDCGLTIAGFYYVCFSCSDGSINGFYYDPNSSPFQKLELKSTNEGRSGFSFSSYELQ*

Click here to download the sequence:
Link to NCBI Protein BLAST