Transcript Information: R_Transcript_82124.p1


Annotated TAIR IDAT2G37680.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Vacuolar import/degradation protein Vid24 (InterPro:IPR018618); Has 318 Blast hits to 317 proteins in 131 species: Archae - 0; Bacteria - 0; Metazoa - 80; Fungi - 184; Plants - 51; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:15803500-15805515 | Reverse length=215
E-Value5.2E-39
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.4661500208354
Replicate 22.457013878503
Replicate 34.8737739566282
Condition 2: 8 Hour
Replicate 12.6048792497069
Replicate 21.4272903302884
Replicate 34.4413515347755
Condition 3: 24 Hour
Replicate 14.8846398356817
Replicate 21.8770433098364
Replicate 32.7941750664124


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_82124.p1 GENE.R_Transcript_82124~~R_Transcript_82124.p1 ORF type:complete len:94 (+),score=20.03,Vac_ImportDeg|PF09783.5|3.8e-06 R_Transcript_82124:499-780(+)
ATGCCAGTGAGAGTTTCTGAAACCTCTGTGCCTTCCCACATTTCAGGTGGTTGTTCTGGGCAGACTTCTCCTCCAGCTTGTACCCTACTGAGCGTGGGGCAGGCTTATTCTGGAACTCAAAATGTTTCTAGTGTACAAAAGGATGAGGCATGGAGAGTAAATGTCCGGATACAAGGTTGTGACCTTGAGCATGGATATTTATGTGGCACAATGGAAGCTCTCAATGTTCCAATGGCAGATACACCTGTAAGGAGCTTTGTTCCAATGTGCATTAAATTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_82124.p1 GENE.R_Transcript_82124~~R_Transcript_82124.p1 ORF type:complete len:94 (+),score=20.03,Vac_ImportDeg|PF09783.5|3.8e-06 R_Transcript_82124:499-780(+)
MPVRVSETSVPSHISGGCSGQTSPPACTLLSVGQAYSGTQNVSSVQKDEAWRVNVRIQGCDLEHGYLCGTMEALNVPMADTPVRSFVPMCIKF*

Click here to download the sequence:
Link to NCBI Protein BLAST