Transcript Information: R_Transcript_82185.p1


Annotated TAIR IDAT1G27530.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-fold modifier-conjugating enzyme 1 (InterPro:IPR014806); Has 269 Blast hits to 269 proteins in 110 species: Archae - 0; Bacteria - 0; Metazoa - 175; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:9562761-9563887 | Reverse length=174
E-Value2.4E-77
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.547472640603
Replicate 25.8410760556619
Replicate 310.161635474985
Condition 2: 8 Hour
Replicate 19.5734208816297
Replicate 27.3975849700163
Replicate 38.0522182451341
Condition 3: 24 Hour
Replicate 19.4938300565694
Replicate 27.462305639669
Replicate 38.3930296167802


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_82185.p1 GENE.R_Transcript_82185~~R_Transcript_82185.p1 ORF type:complete len:133 (+),score=18.08,UFC1|PF08694.7|5.2e-48 R_Transcript_82185:243-641(+)
ATGGAGGGGTGGGACACAACAACGAAATCAACGCTAACCCAGATCCCACTCCTAACAACAAAGGCAGGGCCAAGAGATGGAGCAGCCTGGACTCAAAGACTAAAGGAAGAGTACAAGGCTTTGATTGCTTACACATCAATGAACAAAGCCAATGACAATGACTGGTTTAGAATCTCAGCTGCTAATCCTGAAGGTACTAAATGGACTGGCAAGTGTTGGTATGTTCATAATCTTCTCAAGTATGAGTTCGATCTCCAATTCGATATTCCCGTCACTTATCCTGCCACTGCTCCTGAACTTGAGCTCCCCCAACTCGACGGCAAGACCCACAAGTTTGGGAATTCGTACTGTTGGATTTTGGTGGGTTGTAGATGTACCGTGGAGGGAAGATTTGCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_82185.p1 GENE.R_Transcript_82185~~R_Transcript_82185.p1 ORF type:complete len:133 (+),score=18.08,UFC1|PF08694.7|5.2e-48 R_Transcript_82185:243-641(+)
MEGWDTTTKSTLTQIPLLTTKAGPRDGAAWTQRLKEEYKALIAYTSMNKANDNDWFRISAANPEGTKWTGKCWYVHNLLKYEFDLQFDIPVTYPATAPELELPQLDGKTHKFGNSYCWILVGCRCTVEGRFA*

Click here to download the sequence:
Link to NCBI Protein BLAST