Transcript Information: R_Transcript_82186.p1


Annotated TAIR IDAT1G27530.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-fold modifier-conjugating enzyme 1 (InterPro:IPR014806); Has 269 Blast hits to 269 proteins in 110 species: Archae - 0; Bacteria - 0; Metazoa - 175; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:9562761-9563887 | Reverse length=174
E-Value3.1E-121
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1104.65030947372
Replicate 294.801477637225
Replicate 398.429557307103
Condition 2: 8 Hour
Replicate 181.471150642652
Replicate 294.322265221001
Replicate 392.738228805977
Condition 3: 24 Hour
Replicate 199.762107771296
Replicate 2101.18685442526
Replicate 397.234469912095


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_82186.p1 GENE.R_Transcript_82186~~R_Transcript_82186.p1 ORF type:3prime_partial len:165 (+),score=25.97,UFC1|PF08694.7|1.3e-83 R_Transcript_82186:243-734(+)
ATGGAGGGGTGGGACACAACAACGAAATCAACGCTAACCCAGATCCCACTCCTAACAACAAAGGCAGGGCCAAGAGATGGAGCAGCCTGGACTCAAAGACTAAAGGAAGAGTACAAGGCTTTGATTGCTTACACATCAATGAACAAAGCCAATGACAATGACTGGTTTAGAATCTCAGCTGCTAATCCTGAAGGTACTAAATGGACTGGCAAGTGTTGGTATGTTCATAATCTTCTCAAGTATGAGTTCGATCTCCAATTCGATATTCCCGTCACTTATCCTGCCACTGCTCCTGAACTTGAGCTCCCCCAACTCGACGGCAAGACCCACAAGATGTACCGTGGAGGGAAGATTTGCTTGACTGTGCATTTCAAGCCACTTTGGGCTAAAAATTGCCCTAGGTTTGGAATAGCTCATGCTCTCTGTTTGGGTCTTGCCCCATGGCTTGCAGCCGAGATTCCCATTCTCGTGGATTCTGGAATGATCAAGCAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_82186.p1 GENE.R_Transcript_82186~~R_Transcript_82186.p1 ORF type:3prime_partial len:165 (+),score=25.97,UFC1|PF08694.7|1.3e-83 R_Transcript_82186:243-734(+)
MEGWDTTTKSTLTQIPLLTTKAGPRDGAAWTQRLKEEYKALIAYTSMNKANDNDWFRISAANPEGTKWTGKCWYVHNLLKYEFDLQFDIPVTYPATAPELELPQLDGKTHKMYRGGKICLTVHFKPLWAKNCPRFGIAHALCLGLAPWLAAEIPILVDSGMIKH

Click here to download the sequence:
Link to NCBI Protein BLAST