Transcript Information: R_Transcript_82217.p1


Annotated TAIR IDAT5G05180.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G10880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:1536924-1538318 | Forward length=432
E-Value2E-32
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 127.183594211534
Replicate 220.906187538975
Replicate 325.708634684094
Condition 2: 8 Hour
Replicate 115.605798045776
Replicate 214.491386944288
Replicate 320.800343500615
Condition 3: 24 Hour
Replicate 132.909474738426
Replicate 229.059933388014
Replicate 334.428514024669


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_82217.p1 GENE.R_Transcript_82217~~R_Transcript_82217.p1 ORF type:complete len:466 (+),score=138.83 R_Transcript_82217:351-1748(+)
ATGGCAGACGACAACTCTAATGGACGGCTTGAAGATAATATCCTTGAAAATGAAGCAGAAGTGCCTGTTGATGTCAATGGATCTGACGTAGATGAAGAGCATTCTCTAAAAACTCCGGAACAAAAGGTTGATACACAGAAGGAAGCCTCCAATCTCAGCTCTAGTGATGTTAGTTCTGATCTCTCGACAAAAGAAGGATCAGAAACCATGTCGTCTTCCTCTTCCTCATCAGATGCTGAATCAGGTACATATAAATTGCCTGTGAAAAAGTATCTGCTGGAACATGTCGATGGTGATGAAGAAGACCTGGAGTCTAAAATTATGGAATCCGAAGTTGGTGGAGGAGGGCTCTTTAAGGAAACAAAGGACACTGTGTATGAAGAATTGCTCGAGAAAGTGGCTAATTATGAGATTGAGCTCAAGTCTGCAAAGAAGAAGATTGAATGTTCACAAAATGAGATTGCCAGGTTAAAGTATGAGAATTTGACTTTGGTAGAAGAGCTTGGCCAGACAATTGAAAAGCTTCAGACTTCTAAGGATAACATGGAGAAAATGGAGCAGAAGCTCACAAATGAATTCCAGAAAAATCAGGATCAATTTCAAGGTCAGCTTGATTTGGCAAACCAAAGTATCGAGCAGTTGCATGCTGAACTGGCTTCTGAGAGGAGTTTTGTTTCTGAGTTGCAACAGGTTGCGGTAAAGACTACAAATGATTTACGTGATTATGGTCGAGAAATTGATGGACTGAAACTTGCCCTACATGATGCCCAAGAAGATTTCTCGCATGACAGGTCACAATTCCAGTCTGAGATGATCCATTTACGTGAGCAAAGGGATGCCTTAGATGCAAAACTAAAGGAATCTGAGCAGAAAAATCAACTCTTAGAAGATCAGATTCGACAGAATGAGGTGGAAAGGGTTGAAAGCAGAAGTTTGCATGAAGCTCAAGAGACAGCTTTGCTAGATGAAATCAAACAATTGAAGGTTGAATTGTCTGAAAGATGTGAAATTGTTGATTCTTTGAACAAAAGCCTCGATGCTTGCAAACTAAGTTATGACATGCTAACGGCTGAAAAAGATCAGATGTTTGCCCAGGTGCAGAAACTAAGCGCTGAACTGAATTCTCAGGACATCAATATCAGCCAATTAAAAGTGGAACATGGAGAGCTGGTTGCTGAATCAGTGAAAACACAGAAGCTAGTCGAGGAATTAAGGCTGAAAGTAGTGGATCAGGAGAAGGAGCTTGAGAAGCAAAGAGCGGTTATGAGTGACAGGGCAGAGGAGAAAAGGGAGGCAATTCGGCAGCTTTGTTTCTCGTTGGAATATTACAGGAATGGATACCATGAACTCAGCCAGGCGTTCATCAAGCGCAAACAGCCAGCGATTCTGGTCTCGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_82217.p1 GENE.R_Transcript_82217~~R_Transcript_82217.p1 ORF type:complete len:466 (+),score=138.83 R_Transcript_82217:351-1748(+)
MADDNSNGRLEDNILENEAEVPVDVNGSDVDEEHSLKTPEQKVDTQKEASNLSSSDVSSDLSTKEGSETMSSSSSSSDAESGTYKLPVKKYLLEHVDGDEEDLESKIMESEVGGGGLFKETKDTVYEELLEKVANYEIELKSAKKKIECSQNEIARLKYENLTLVEELGQTIEKLQTSKDNMEKMEQKLTNEFQKNQDQFQGQLDLANQSIEQLHAELASERSFVSELQQVAVKTTNDLRDYGREIDGLKLALHDAQEDFSHDRSQFQSEMIHLREQRDALDAKLKESEQKNQLLEDQIRQNEVERVESRSLHEAQETALLDEIKQLKVELSERCEIVDSLNKSLDACKLSYDMLTAEKDQMFAQVQKLSAELNSQDINISQLKVEHGELVAESVKTQKLVEELRLKVVDQEKELEKQRAVMSDRAEEKREAIRQLCFSLEYYRNGYHELSQAFIKRKQPAILVS*

Click here to download the sequence:
Link to NCBI Protein BLAST