Transcript Information: R_Transcript_8228.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value1E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.66471202043
Replicate 22.3530336673437
Replicate 33.3570218890913
Condition 2: 8 Hour
Replicate 13.9050732890003
Replicate 24.0480906781457
Replicate 35.8679775712458
Condition 3: 24 Hour
Replicate 16.2342321351093
Replicate 23.2322362167225
Replicate 34.9058648436149


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_8228.p1 GENE.R_Transcript_8228~~R_Transcript_8228.p1 ORF type:internal len:232 (+),score=32.80,RVT_1|PF00078.23|1.8e-32 R_Transcript_8228:3-695(+)
AACGAAGTGGTTGATGACGCTAGAAGAACTGGTTTCAAGGGGGTGGTCTTTAAACTGGACTTTGAGAAGGCTTATGATAGGGTGTCCTGGGGCTTTTTGGATAAGGTGTTGGAGGCTAAGGGCTTTGGTGAGCGGTGGCGTAAGTGGATTAGGGGCTGCTTTAGTAATGCTAGCTTCTCGGTACTGATTAATGGGGCCCCCAGAGACTGGTTTCCTTCTTCCCGGGGTTTGAGACAGGGGGACCCTCTATCCCCTTTCCTTTTCACCTTGGTGGTGGACGTCTTGAGCCGTATGATAGATAGGGGGGTGGAGGCACGGGAAGTGGAGTGTTTTAGAGTCGGGAGGGAAGGTATCTCTGTCTCCCATCTCCAGTTTGCAGATGATACTATTCTATTCCTCTCTGCAAGTCATGAGGTCCTTCGCAAGGTCCTTACCCTTCTAGAGGTTTTCGAGTTGGTTTCTGGCTTGCGGGTTAACCTTTCTAAGTGTGGCCTAGCTGGCATTAATGTGGATGAGGGTTTTTTGGGGTGTCTGGCTAGGGAGGTGGGCTGTGAGGTTCAACATTGGCCTGTTACCTATTTAGGTCTTCCTTTGGGGGGTAATCCTAGGGCATCGTCTTTCTGGGATCCAGTGGTGTCTAGAGTTGCTAAGCGACTGGATGGTTGGAAGGGGAGGTACTTCTCGTTGGGCGGC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_8228.p1 GENE.R_Transcript_8228~~R_Transcript_8228.p1 ORF type:internal len:232 (+),score=32.80,RVT_1|PF00078.23|1.8e-32 R_Transcript_8228:3-695(+)
NEVVDDARRTGFKGVVFKLDFEKAYDRVSWGFLDKVLEAKGFGERWRKWIRGCFSNASFSVLINGAPRDWFPSSRGLRQGDPLSPFLFTLVVDVLSRMIDRGVEAREVECFRVGREGISVSHLQFADDTILFLSASHEVLRKVLTLLEVFELVSGLRVNLSKCGLAGINVDEGFLGCLAREVGCEVQHWPVTYLGLPLGGNPRASSFWDPVVSRVAKRLDGWKGRYFSLGG

Click here to download the sequence:
Link to NCBI Protein BLAST