Transcript Information: R_Transcript_82326.p1


Annotated TAIR IDAT5G54148.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G54150.1); Has 104 Blast hits to 102 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 0; Plants - 88; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:21976465-21977032 | Reverse length=116
E-Value3E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.84897492812645
Replicate 20.61035757024122
Replicate 30.39953612086312
Condition 2: 8 Hour
Replicate 10.99651775948091
Replicate 20.39001538095091
Replicate 30.31659785965791
Condition 3: 24 Hour
Replicate 11.4682318575857
Replicate 21.0258259949106
Replicate 30.38176229105053


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_82326.p1 GENE.R_Transcript_82326~~R_Transcript_82326.p1 ORF type:5prime_partial len:172 (+),score=51.25 R_Transcript_82326:1-516(+)
TTGAATCTTAATACTAGTAGTAGCATTAATGGTGATGGAAAAAAAGGGTCTTTTGTTTGTGTGAAAAGGAGGGAGGATGTTAAGAAAGTTGAGCAGGTTGAGGATTGTTTTATTCTCGACTTTGATCCTTATGATACTCTCAGTGATGATGATGACGACGATGAGGAGGAGGAGGAGGACGACGACGATGATGATTGTATAGAAATAGGGGCAATAGTGTGTGTTAAGAGAATGGAAGATGTGAAGAAAGTAGAGGAAGCGGAGGACTGTTTCATATTGGAGTTTGATCCTAGTGACCCTGTGAAATTTTCTAACTTGTCTTTGTGTGCTCCCAAAACTGAGCCTATAACTGTTGAGGAAGATGTGTCCATTTTAGCTGAGAATGGCCAGTGTTATTGCTATGTTTGTGATATACCTGCGCCTTGTGCGGAATGGGATCAAGGCTCAATGCATTGTGATGCTACTGATAAAAGTCTTGAGTGGAGGAGACGCAGGGACCTTAGAAAGCCGCAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_82326.p1 GENE.R_Transcript_82326~~R_Transcript_82326.p1 ORF type:5prime_partial len:172 (+),score=51.25 R_Transcript_82326:1-516(+)
LNLNTSSSINGDGKKGSFVCVKRREDVKKVEQVEDCFILDFDPYDTLSDDDDDDEEEEEDDDDDDCIEIGAIVCVKRMEDVKKVEEAEDCFILEFDPSDPVKFSNLSLCAPKTEPITVEEDVSILAENGQCYCYVCDIPAPCAEWDQGSMHCDATDKSLEWRRRRDLRKPQ*

Click here to download the sequence:
Link to NCBI Protein BLAST