Transcript Information: R_Transcript_82327.p1


Annotated TAIR IDAT5G54150.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G54148.1); Has 103 Blast hits to 99 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:21977461-21978237 | Reverse length=160
E-Value6E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.352071181831
Replicate 20
Replicate 30.16967953774928
Condition 2: 8 Hour
Replicate 10.181376777387
Replicate 20.8281808089328
Replicate 30
Condition 3: 24 Hour
Replicate 10.51017349394898
Replicate 20.49011686423505
Replicate 30.48639343748661


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_82327.p1 GENE.R_Transcript_82327~~R_Transcript_82327.p1 ORF type:5prime_partial len:135 (+),score=21.16 R_Transcript_82327:3-407(+)
GCCGTGGTAGATAATGTGAAGATGAGGATCAAACCCCAATTACAATACACAAACTCAAAAGCAGCGGGCGCATCATTGAGTTTCTGTACGGCGAGAATTAGGTCCGAAGGGCATATTTTTGTAAAGGGTAAAGAAGGTAACGGGGACAGGATTAATGATGGCATTGCTTCAACTGCTCTTTTTAAAGAGAAGGGATCAATTTCGAAGGTGAAGGATAAGAAACGTGCGAGAGAGACGGAAGAGGATGAAGATTGCTTTATTTTGGACTTTAATCCTTTTAAATCTGTTGATTTCTCTACTCTTTCTAAGTCCCTTGTCCAAGATGATGATGGTGAGGCTTCTGATATCTCCATTCTAGGTCAAGAGGGTCAGGTAATAACCTTGAAACCTTTTGTTGGGGTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_82327.p1 GENE.R_Transcript_82327~~R_Transcript_82327.p1 ORF type:5prime_partial len:135 (+),score=21.16 R_Transcript_82327:3-407(+)
AVVDNVKMRIKPQLQYTNSKAAGASLSFCTARIRSEGHIFVKGKEGNGDRINDGIASTALFKEKGSISKVKDKKRARETEEDEDCFILDFNPFKSVDFSTLSKSLVQDDDGEASDISILGQEGQVITLKPFVGV*

Click here to download the sequence:
Link to NCBI Protein BLAST