Transcript Information: R_Transcript_82330.p1


Annotated TAIR IDAT4G27660.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G54150.1); Has 115 Blast hits to 109 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 0; Plants - 100; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:13817249-13818027 | Reverse length=182
E-Value2E-30
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.7359861603225
Replicate 22.2101368859261
Replicate 34.1526834238639
Condition 2: 8 Hour
Replicate 13.7229970095227
Replicate 24.0537271174079
Replicate 34.1929159035397
Condition 3: 24 Hour
Replicate 14.7660944829444
Replicate 22.9664968098437
Replicate 34.5439386923091


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_82330.p1 GENE.R_Transcript_82330~~R_Transcript_82330.p1 ORF type:complete len:342 (+),score=67.81,zf-CCHC|PF00098.19|0.00093,zf-CCHC|PF00098.19|3.8e-05,zf-CCHC|PF00098.19|6.7e+03 R_Transcript_82330:271-1296(+)
ATGGCAACATCATCATCGTCAACAACAACAGAAGAAGAGCAACAACCAGAAGAGTACGAGAGCAAAACAACAAACAAATACACAGGCAAAGTCAAGTGGCTCGACACTCAAGGCTCCGGCTCCATACTCTCCGACCACGACTCAAAAGAAGTCTTAATCACTCCATCTTCATATGAGTCTAGGACTATCCGAGAAGGGGACCGGGTCCAATTCCGGGTCTTGGAGAGGAACTCAACCCCCAGTTACAAGGCAACTGATGTGATCCGGTATGGGCCCCAGTGCTATTCCTGTTCTAGGTTTGGTCATTTTGCTAATCGTTGCCCTCAAAGAAGGAATCTTGATTCTCATAAGTGTTATAGGTGTGGGTTAAAGGGTCATTATGCTAGGGATTGTAAGTCACCTCATTTCATGAATTCTGGGTTTTTGAATCTTAATACTAGTAGTAGTATTAATGGTGGTGGAAAAAAGGGGTCTTTTGTTTGTGTGAAAAGGAGGGAGGATGTTAAGAAAGTTGAGCAGGTTGAGGATTGTTTTATTCTCGACTTTGATCCTTATGATACTCTCAGTGATGATGATGACGACGATGAGGAGGAGGAGGAGGACGACGACGATGATGATTGTATAGAAATAGGGGCAATAGTGTGTGTTAAGAGAATGGAAGATGTGAAGAAAGTAGAGGAAGCGGAGGACTGTTTCATATTGGAGTTTGATCCTAGTGACCCTGTGAAATTTTCTAACTTGTCTTTGTGTGCTCCCAAAACTGAGCCTATAACTGTTGAGGAAGATGTGTCCATTTTAGCTGAGAATGGCCAGGTGGCTTGTAGGGACTATCCACATCCAAGGCATCTCTGTGCCTTACATCCTTTTAGTAAGACATTTCATGAGATCCATTGTAAATTGTGTTATTGCTATGTTTGTGATATACCTGCGCCTTGTGCGGAATGGGATCAAGGCTCAATGCATTGTGATGCTACTGATAAAAGTCTTGAGTGGAGGAGACGCAGGGACCTTAGAAAGCCGTGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_82330.p1 GENE.R_Transcript_82330~~R_Transcript_82330.p1 ORF type:complete len:342 (+),score=67.81,zf-CCHC|PF00098.19|0.00093,zf-CCHC|PF00098.19|3.8e-05,zf-CCHC|PF00098.19|6.7e+03 R_Transcript_82330:271-1296(+)
MATSSSSTTTEEEQQPEEYESKTTNKYTGKVKWLDTQGSGSILSDHDSKEVLITPSSYESRTIREGDRVQFRVLERNSTPSYKATDVIRYGPQCYSCSRFGHFANRCPQRRNLDSHKCYRCGLKGHYARDCKSPHFMNSGFLNLNTSSSINGGGKKGSFVCVKRREDVKKVEQVEDCFILDFDPYDTLSDDDDDDEEEEEDDDDDDCIEIGAIVCVKRMEDVKKVEEAEDCFILEFDPSDPVKFSNLSLCAPKTEPITVEEDVSILAENGQVACRDYPHPRHLCALHPFSKTFHEIHCKLCYCYVCDIPAPCAEWDQGSMHCDATDKSLEWRRRRDLRKPW*

Click here to download the sequence:
Link to NCBI Protein BLAST