Transcript Information: R_Transcript_82457.p1


Annotated TAIR IDAT4G11910.1
Annotated Gene NameINVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: non-yellowing 1 (TAIR:AT4G22920.1); Has 206 Blast hits to 202 proteins in 67 species: Archae - 0; Bacteria - 86; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:7156435-7157839 | Forward length=271
E-Value1.9E-115
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 121.802147807025
Replicate 211.300092237938
Replicate 315.748382097355
Condition 2: 8 Hour
Replicate 110.71256591442
Replicate 215.373106265815
Replicate 318.90792772957
Condition 3: 24 Hour
Replicate 116.500923944912
Replicate 210.951048685252
Replicate 314.135809276955


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_82457.p1 GENE.R_Transcript_82457~~R_Transcript_82457.p1 ORF type:complete len:288 (+),score=65.18,Staygreen|PF12638.3|1.9e-59 R_Transcript_82457:331-1194(+)
ATGGCCACTTTGACTGCATCTATGTTGCTGCCATCAAAGCTGAAACCTTCTTCAGTTTTGGAAGATTCAAGATCATCATGTAGAGGTCTACCCAAGTTCAAGAGGAATCATTCTTGTTCTCCTGTGATGAGATTGTTTGGGCCAGCAATATTTGAAGCATCAAAGTTGAAGGTGTTGTTCTTGGGAGTGGATGAAGAGAAACACCCAGCAAAGTTGCCCAGAACTTATACTTTAACTCATAGTGATATCACTTCCAAACTTACTCTGGCCATCTCTCAAACTATTAATAACTCCCAGTTACAAGGGTGGTATAATAAACTACAGAGAGATGAGGTGGTGGCAGAATGGAAGAAAGTGAAGGGGAAGATGTCTCTTCATGTTCATTGTCACATAAGTGGTGGTCATTTCCTCTTAGACTTGTGTGCTAGGCTCAGATACTACATCTTTTGCAAGGAGCTTCCTGTGGTAATGAAGGCATTTGTACATGGAGATGAAAATTTGTTCAACAACCACCCGGAACTACAGGAGGCATTGGTGTGGGTGTATTTTCATTCAAACCTACCAGAATTCAACAAAGTCGAGTGCTGGGGCCCACTCAAGGATGCAGTTTCTCGCAACTTGAAAAAAAATAAGCTAGATTATGATCTTAATAATCTTACTTGTAGTGAAGAACAAGCCAAAGATGAGTCATTGATAAGTATCCCAAATTTGGAGATGCCACAGCCTTGCAAGCAACCTTGTACCTGTTGCTTTCCTTCTCCTAGTGTCATCCCTTGGTCTCAATCCTTGTCACAACTGGAGCTCCGTGATGATCTCTCCGGTGACAGGGCCCGCCACCAAGGCTTGAAGCAACAGCAAAGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_82457.p1 GENE.R_Transcript_82457~~R_Transcript_82457.p1 ORF type:complete len:288 (+),score=65.18,Staygreen|PF12638.3|1.9e-59 R_Transcript_82457:331-1194(+)
MATLTASMLLPSKLKPSSVLEDSRSSCRGLPKFKRNHSCSPVMRLFGPAIFEASKLKVLFLGVDEEKHPAKLPRTYTLTHSDITSKLTLAISQTINNSQLQGWYNKLQRDEVVAEWKKVKGKMSLHVHCHISGGHFLLDLCARLRYYIFCKELPVVMKAFVHGDENLFNNHPELQEALVWVYFHSNLPEFNKVECWGPLKDAVSRNLKKNKLDYDLNNLTCSEEQAKDESLISIPNLEMPQPCKQPCTCCFPSPSVIPWSQSLSQLELRDDLSGDRARHQGLKQQQS*

Click here to download the sequence:
Link to NCBI Protein BLAST