Transcript Information: R_Transcript_82466.p1


Annotated TAIR IDAT5G28840.1
Annotated Gene NameGDP-D-mannose 3',5'-epimerase
Annotated Gene Symbol(s)GME
Annotation TypeOrtholog
Chromosome Positionchr5:10862472-10864024 | Reverse length=377
E-Value4.9E-270
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 173.977608948754
Replicate 259.656155151069
Replicate 363.084428141785
Condition 2: 8 Hour
Replicate 132.971707032137
Replicate 231.23424765118
Replicate 344.178523203058
Condition 3: 24 Hour
Replicate 176.76896385137
Replicate 272.350584720412
Replicate 368.847832996616


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_82466.p1 GENE.R_Transcript_82466~~R_Transcript_82466.p1 ORF type:complete len:378 (+),score=92.72,Epimerase|PF01370.17|6.4e-48,GDP_Man_Dehyd|PF16363.1|3.2e-30,3Beta_HSD|PF01073.15|2.2e-10,NAD_binding_4|PF07993.8|2.3,NAD_binding_4|PF07993.8|0.00012 R_Transcript_82466:537-1670(+)
ATGGGGAGTAATGACGGAAATGATTATGGTGCTTACACTTATGACAAGCTTGAGAGAGAGCCATACTGGCCATCACAAAAGCTGAGAATATCGGTCACTGGGGCCGGAGGTTTCATTGGGTCCCACCTTGCTCGGCGTCTGAAAAGGGAAGGCCACTATGTCATTGCTTCTGACTGGAAGAGAAATGAGCACATGACTGAGGACATGTTTTGTGATGAATTCCATCTTGTTGATCTTAGGGTTATGGAGAATTGTTTGAAGGTCACCAAAGATGTTGATCATGTCTTTAACCTTGCTGCTGATATGGGTGGCATGGGCTTCATCCAGTCAAATCACTCTGTCATTATGTACAACAACACAATGATCAGTTTCAACATGCTTGAGGCTGCCAGAATTAATGGTGTTAAAAGGTTCTTTTATGCCTCAAGTGCGTGCATTTATCCTGAATTTAAGCAGTTGGAAACTACTAATGTGAGTCTTAAGGAGTCTGATGCCTGGCCTGCAGAGCCCCAAGATGCTTATGGCTTGGAAAAACTTGCTACTGAGGAGTTGTGCAAGCATTACACCAAAGACTTTGGAATTGAATGCAGAATTGGAAGGTTTCACAACATTTACGGTCCTTTTGGTACCTGGAAAGGTGGTAGAGAGAAGGCTCCGGCTGCTTTTTGCAGAAAGGCTATTACTTCAACTGATAAATTTGAGATGTGGGGAGATGGACTGCAGACTCGATCTTTCACATTCATTGATGAATGTGTGGAAGGTGTACTTCGATTGACCAAGTCGGATTTTCGGGAGCCTGTGAACATTGGAAGTGATGAGATGGTTAGTATGAATGAGATGGCTGAGATCGTTTTGAGCTTTGACGAAAAAAAGCTTCCTATCCATCATATTCCTGGCCCTGAGGGTGTTCGTGGCCGTAACTCGGACAACACACTGATTAAAGAGAAACTTGGCTGGGCCCCAACCATGAGATTGAAGGATGGGCTTCGGATTACATACGCGTGGATCAAGGATCAGATTGAGAAAGATAAGTCTCAAGGCACGGACCTGTCAGTTTATGGTTCCTCAAAGGTGGTGGGCACACAAGCTCCGGTTCAGTTGGGTTCACTACGTGCTGCGGATGGCAAGGAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_82466.p1 GENE.R_Transcript_82466~~R_Transcript_82466.p1 ORF type:complete len:378 (+),score=92.72,Epimerase|PF01370.17|6.4e-48,GDP_Man_Dehyd|PF16363.1|3.2e-30,3Beta_HSD|PF01073.15|2.2e-10,NAD_binding_4|PF07993.8|2.3,NAD_binding_4|PF07993.8|0.00012 R_Transcript_82466:537-1670(+)
MGSNDGNDYGAYTYDKLEREPYWPSQKLRISVTGAGGFIGSHLARRLKREGHYVIASDWKRNEHMTEDMFCDEFHLVDLRVMENCLKVTKDVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAYGLEKLATEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAITSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFDEKKLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITYAWIKDQIEKDKSQGTDLSVYGSSKVVGTQAPVQLGSLRAADGKE*

Click here to download the sequence:
Link to NCBI Protein BLAST