Transcript Information: R_Transcript_82498.p1


Annotated TAIR IDAT3G17780.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular protein transport; LOCATED IN: endomembrane system, integral to membrane, endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: B-cell receptor-associated 31-like (InterPro:IPR008417); BEST Arabidopsis thaliana protein match is: B-cell receptor-associated 31-like (TAIR:AT1G48440.1); Has 102 Blast hits to 102 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 102; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:6087016-6088128 | Forward length=129
E-Value5.8E-66
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1216.22738361744
Replicate 2252.27862500198
Replicate 3237.87765965235
Condition 2: 8 Hour
Replicate 1174.60305235459
Replicate 2207.44018077284
Replicate 3200.50548346828
Condition 3: 24 Hour
Replicate 1192.84558071271
Replicate 2185.43383051847
Replicate 3178.30060971865


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_82498.p1 GENE.R_Transcript_82498~~R_Transcript_82498.p1 ORF type:complete len:130 (+),score=24.83,Bap31|PF05529.8|1.3e-05 R_Transcript_82498:266-655(+)
ATGGCGTTGCAATGGATGATACTAACCTACATAGTAGCAGCAGAAGCTGGGATACTGCTATTACTCACACTTCCTTCCCCAAAGCTTCTCAAGTCTCGTCTTGTTTCTCTTGTTTCTCTCCTCCTTCAACCGTTAATGTTCATTGTCCCTTTTGCTGCATTCCAGCTTCTCGATATTTATTGGAAGAATGAGCATCGGTTGATGTGCACTTCTGAGATCTGTACTGCTGCTGAGCGAGATCGCTATGAGAAATCGGTCTACAAATCTCAGAGGAATGTGATTCTGTGCGCCACAGCCTGCCTCCTCTACTGGTGCATCCAACGTGTTTGCAAATACTACAAGGACATCCAAAACCTTGAGGAGGTTGAAAAGAGGTACAAGAAGCTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_82498.p1 GENE.R_Transcript_82498~~R_Transcript_82498.p1 ORF type:complete len:130 (+),score=24.83,Bap31|PF05529.8|1.3e-05 R_Transcript_82498:266-655(+)
MALQWMILTYIVAAEAGILLLLTLPSPKLLKSRLVSLVSLLLQPLMFIVPFAAFQLLDIYWKNEHRLMCTSEICTAAERDRYEKSVYKSQRNVILCATACLLYWCIQRVCKYYKDIQNLEEVEKRYKKL*

Click here to download the sequence:
Link to NCBI Protein BLAST