Transcript Information: R_Transcript_82521.p1


Annotated TAIR IDAT2G02160.1
Annotated Gene NameCCCH-type zinc finger family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:553407-555899 | Reverse length=669
E-Value2E-44
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.928732548349
Replicate 21.9996476586951
Replicate 32.312489700183
Condition 2: 8 Hour
Replicate 13.3580614784793
Replicate 23.7481097181416
Replicate 34.4601100381522
Condition 3: 24 Hour
Replicate 14.1105407226746
Replicate 24.4950718119843
Replicate 35.1279765266445


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_82521.p1 GENE.R_Transcript_82521~~R_Transcript_82521.p1 ORF type:complete len:525 (+),score=121.35,zf-CCCH_3|PF15663.1|9.5e-12,zf-CCCH_3|PF15663.1|0.0016 R_Transcript_82521:202-1776(+)
ATGGAGGAAGAATTACTCAAGCGTAACACCGATTGTGTATATTTCCTGGCCTCTCCTTTTACATGCAAGAAGGGAGCAGAGTGTGAGTACAGGCATAGTGAAATGGCGAGATTGAATCCTCGAGATTGCTGGTATTGGTTATCTGGGAATTGTCTCAACCCTACCTGTGGGTTTCGTCACCCGCCCTTAGAAGTGCACACTGAAGTATCATCAGAAGCTGCTGCTCCTCTGCTGAATCAGTCTTCTGCGCCTGCAACCAAGACCACTGTCCCATGTTTTTATTACTTCAGTGGATTTTGCAACAAAGGTGACAGATGCCCTTTCCTGCACGAGCCTGATGATGCTTATGCTGGGAAACAACAGGCGGCCAACTCTACTGCTAATCTTGTGGTGCAACCCTTGGACAGAAAGACATCTCGAAGGACTGACACAGAGCCAGCACCAGAAAAGAAACCTTCTTCGTCATCTGAGATGACCATGAAAGGCAGTCGTCTTTTGCAGGTTTACCAGAAAGCGCAGGTCCAAAAGCCACTTTCAGATGATATGCTGGAACTGAAATCATCTGCACAAGCCAGCATTTCTGAGTATGAGGAAACAGATGCTGCTAAGACAGTGTCCTTGAAGCCTGCAGAAGGCTCAGATAAAAGTGAGGGTGAGCCTAGCTTTGATTCTGAAAGAAGTTCAGAGGAGCTGATTGATGAAAATATGGTGCGAGATGAGTATTTGGAATCATCACCAGGTTTTGATGTCCTTGTGGATGGAAAGACAGACGATCTGGCATATGACAACGATTCAGAGTATTTACATGCTCCTGATGGGAGTGATGGAGACCGCGAATGCCTTTATATGCAGCATGGTTATGTTGATCAGAATGGTTTCGATGAAACAGTATATTTCAGAAATGGACTTTATGACCCTTCTGAGCATATAGACGATGAGTTTAGAGGTGATCATGGCAAATATTCTCCAAGGCATTCATTGGACAGAAAAGTAGGCCACTTTGTCAGGCATAAGAGGAAATTTATGTTTGCGGATTTTCCAGTTGCTAGCCACGACAGTATGGATCTACGAGATTATCTGAGGAAGAGAAGGATGGTTGGTGGTTTGTTGGAGGCACACAATTTCAGGCATGACTTGGCATGTAGGAGAGATGAGAGGAAGGAGAGGGTTAAAAGACAAGCACGGCATCAACGATTACATGGAAGGGTAACATCAAAGATGGAGAGAAGTGGGCTTGTATTGGCAAGGCGAACTGTGGCAGTTGATGCACACCAGCGGGACAGACCTAGGAACCCACGGCGTAATGGGTCCAGGGAGTATGACGGGATGAGACGATGTCCATTAGCTACTGAAGGCAGACGGAGATCATCTCCCAAAAGAGAGAGGTGTAGCCAGGGCTCTGCCACATTTGTAGGACCTAAGAGCCTGGCTGAGATCAAGCAAGAAAAGAGAGTGGGGGATACTCTTGGAAACGGCTGTGTGGACTTTGATGGTCCGAAACCTTTGAGAGAAATCCTCAAGGAGAAAAGGAAGGCAACTTCCTCGAGGCATGGCGACTTCAGCAGTACCTTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_82521.p1 GENE.R_Transcript_82521~~R_Transcript_82521.p1 ORF type:complete len:525 (+),score=121.35,zf-CCCH_3|PF15663.1|9.5e-12,zf-CCCH_3|PF15663.1|0.0016 R_Transcript_82521:202-1776(+)
MEEELLKRNTDCVYFLASPFTCKKGAECEYRHSEMARLNPRDCWYWLSGNCLNPTCGFRHPPLEVHTEVSSEAAAPLLNQSSAPATKTTVPCFYYFSGFCNKGDRCPFLHEPDDAYAGKQQAANSTANLVVQPLDRKTSRRTDTEPAPEKKPSSSSEMTMKGSRLLQVYQKAQVQKPLSDDMLELKSSAQASISEYEETDAAKTVSLKPAEGSDKSEGEPSFDSERSSEELIDENMVRDEYLESSPGFDVLVDGKTDDLAYDNDSEYLHAPDGSDGDRECLYMQHGYVDQNGFDETVYFRNGLYDPSEHIDDEFRGDHGKYSPRHSLDRKVGHFVRHKRKFMFADFPVASHDSMDLRDYLRKRRMVGGLLEAHNFRHDLACRRDERKERVKRQARHQRLHGRVTSKMERSGLVLARRTVAVDAHQRDRPRNPRRNGSREYDGMRRCPLATEGRRRSSPKRERCSQGSATFVGPKSLAEIKQEKRVGDTLGNGCVDFDGPKPLREILKEKRKATSSRHGDFSSTF*

Click here to download the sequence:
Link to NCBI Protein BLAST